Major Coat Protein Of Pf1 Virus (Model For Pf1 Virus)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-23   GLY-24  6.3 6.6 -28.6 8.0 77.7 61.0 24.7
 GLY-24   TYR-25  2.5 3.0 -15.5 -17.3 13.6 18.1 65.6
 TYR-25   ILE-26  3.1 3.6 9.0 -2.9 104.1 132.1 -29.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees