Probable Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-85   GLY-86  5.3 6.5 12.9 0.2 30.0 32.4 185.5
 GLY-86   GLU-87  5.4 5.6 12.0 -7.6 68.2 57.9 79.4
 GLU-87   ILE-88  9.2 9.4 3.0 4.2 64.7 60.2 55.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-110   GLU-111  10.0 9.7 1.7 -10.3 60.1 57.2 -88.7
 GLU-111   CYS-112  10.2 10.0 0.2 13.2 37.9 32.4 110.8
 CYS-112   GLU-113  13.2 12.6 -10.1 5.5 135.6 134.3 -34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-147   PHE-148  0.7 1.0 10.0 -11.5 72.1 72.7 15.4
 PHE-148   LEU-149  3.6 3.1 5.9 7.8 45.4 48.1 151.2
 LEU-149   ARG-150  5.4 5.0 -13.0 2.8 154.2 156.5 -64.8
 ARG-150   GLU-151  2.9 2.7 0.4 2.6 60.9 58.5 -51.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees