Carbamate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-128   PRO-129  11.2 12.0 -29.1 25.2 66.8 71.2 -1.3
 PRO-129   THR-130  8.7 8.9 29.8 11.7 115.9 114.4 -219.2
 THR-130   LYS-131  6.6 6.9 -61.0 38.6 63.5 42.5 159.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-135   PHE-136  4.1 4.1 -5.9 2.7 96.9 100.2 -122.5
 PHE-136   TYR-137  4.3 3.1 -26.4 18.4 132.0 127.9 -49.2
 TYR-137   THR-138  7.6 6.6 -6.7 10.7 121.1 126.4 -77.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-142   LYS-143  12.4 12.2 -42.4 47.2 105.9 99.9 -82.1
 LYS-143   ASP-144  16.1 15.8 -5.6 -1.0 92.8 94.7 -12.7
 ASP-144   LEU-145  17.3 17.2 -23.3 52.2 128.5 127.3 170.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-163   VAL-164  5.4 6.0 -5.1 13.4 39.5 35.9 -56.2
 VAL-164   VAL-165  7.2 7.6 16.4 -17.0 154.9 144.7 44.7
 VAL-165   VAL-166  6.8 7.2 0.1 -4.1 140.6 148.1 40.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees