Ovotransferrin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-81   TYR-82  7.5 7.9 6.1 -7.6 107.1 102.8 -3.6
 TYR-82   GLU-83  5.8 5.7 -4.9 2.3 39.1 35.5 4.1
 GLU-83   HIS-84  4.3 4.4 169.9 -60.7 75.5 76.9 38.7
 HIS-84   THR-85  3.3 1.0 161.0 68.0 68.8 154.2 116.0
 THR-85   GLU-86  0.3 3.0 -53.2 -150.9 51.2 56.6 -197.5
 GLU-86   GLY-87  2.0 3.1 6.4 15.6 82.0 79.4 -1.3
 GLY-87   SER-88  5.5 2.9 -110.1 -56.3 146.3 137.3 -283.2
 SER-88   THR-89  5.8 3.8 6.4 -58.0 46.9 38.5 635.7
 THR-89   THR-90  6.6 4.2 100.6 21.6 43.3 43.5 -466.3
 THR-90   SER-91  3.2 6.0 -98.3 -59.9 83.9 144.2 199.8
 SER-91   TYR-92  2.7 2.8 -148.9 28.2 85.0 75.4 76.9
 TYR-92   TYR-93  2.3 2.1 -0.4 4.7 122.4 125.4 0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-245   ARG-246  6.2 5.5 6.5 -15.9 35.9 42.1 -18.1
 ARG-246   VAL-247  4.4 3.1 -6.6 -18.6 63.6 55.0 37.1
 VAL-247   ALA-248  1.5 1.1 33.7 5.2 45.4 54.7 58.1
 ALA-248   ALA-249  4.6 4.5 -17.3 9.0 105.1 99.5 0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees