Kinesin-Related Motor Protein Eg5

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-180   ARG-181  14.3 14.4 -8.4 -13.8 85.9 94.5 -60.7
 ARG-181   LEU-182  10.6 11.1 -22.6 11.3 132.9 144.4 -48.4
 LEU-182   GLN-183  8.4 9.0 24.5 -27.5 49.5 60.3 -22.9
 GLN-183   MET-184  6.7 7.1 19.5 17.3 82.8 74.2 35.0
 MET-184   PHE-185  3.0 3.6 19.9 3.7 38.8 20.1 122.2
 PHE-185   ASP-186  1.7 2.1 21.7 -37.8 68.8 87.9 -75.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-266   ALA-267  4.2 4.3 -2.3 -1.5 52.2 51.3 5.7
 ALA-267   GLY-268  4.8 4.9 -9.3 -2.3 44.3 50.3 38.0
 GLY-268   SER-269  6.7 6.9 -0.6 8.1 109.4 108.3 -31.9
 SER-269   GLU-270  10.1 10.5 -5.4 27.7 64.8 61.8 -70.5
 ILE-288   ASN-289  10.6 15.1 -5.8 -38.2 84.6 108.1 -27.4
 ASN-289   GLN-290  13.4 11.6 130.4 13.1 28.2 42.5 786.3
 GLN-290   SER-291  13.8 11.8 0.9 -2.7 71.3 84.5 -7.3
 SER-291   LEU-292  10.3 8.8 4.3 4.1 119.4 132.6 -32.6
 LEU-292   LEU-293  11.0 10.0 -13.4 11.2 104.0 105.5 33.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-320   GLN-321  7.4 7.2 23.7 -1.2 125.8 111.0 -61.2
 GLN-321   ASP-322  9.4 9.6 3.7 0.7 108.3 90.5 -1.8
 ASP-322   SER-323  10.7 12.0 -22.4 29.6 137.2 153.5 41.9
 SER-323   LEU-324  12.2 12.4 26.7 -38.1 72.9 72.8 3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees