Baseplate Structural Protein Gp8

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-91   ARG-92  15.4 15.7 -15.3 11.4 66.8 66.6 -10.4
 ARG-92   ARG-93  12.8 12.8 4.6 -7.7 118.3 121.7 48.5
 ARG-93   ASP-94  12.9 12.7 2.0 0.0 108.3 106.5 6.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-120   ALA-121  6.7 6.6 -14.6 15.9 71.2 78.1 -60.9
 ALA-121   THR-122  5.1 5.6 -12.3 -5.9 62.7 55.0 109.3
 THR-122   GLU-123  7.3 7.8 2.6 -10.2 107.9 113.9 58.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-129   VAL-130  2.6 2.5 11.5 -10.4 75.2 81.0 -40.3
 VAL-130   TYR-131  5.3 5.6 1.6 3.1 52.6 51.0 -4.0
 TYR-131   ARG-132  8.3 8.3 -5.5 11.6 107.6 107.4 128.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-171   GLY-172  9.6 10.0 -11.8 4.5 32.4 34.3 84.7
 GLY-172   ARG-173  9.1 8.9 10.8 -3.5 144.0 143.9 -78.1
 ARG-173   GLY-174  8.1 7.9 37.2 -24.6 124.2 127.5 -110.9
 GLY-174   ASP-175  11.5 11.1 -1.9 -29.0 28.8 39.3 420.0
 ASP-175   ALA-176  13.3 12.7 11.8 14.6 128.0 130.6 -245.2
 ALA-176   GLU-177  11.8 10.9 4.7 -16.9 76.6 84.3 62.4
 ALA-176   GLU-177  11.8 10.9 4.7 -16.9 76.6 84.3 62.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-176   GLU-177  11.8 10.9 4.7 -16.9 76.6 84.3 62.4
 ALA-176   GLU-177  11.8 10.9 4.7 -16.9 76.6 84.3 62.4
 GLU-177   GLY-178  10.6 10.0 13.2 -18.1 148.1 155.7 68.4
 GLY-178   THR-179  9.6 9.5 9.3 -3.4 119.2 115.2 -49.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-191   PHE-192  4.8 4.8 6.5 -9.8 84.8 86.6 48.1
 PHE-192   GLU-193  1.6 1.5 7.9 -7.4 16.4 15.9 -10.2
 GLU-193   ILE-194  1.2 1.4 -17.7 23.7 99.2 97.6 47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-195   PRO-196  6.9 7.2 -16.7 20.9 31.9 27.3 -49.1
 PRO-196   ASP-197  8.2 8.0 -15.9 1.6 91.3 88.2 70.0
 ASP-197   VAL-198  11.7 11.6 -7.9 15.3 106.9 113.1 65.3
 VAL-198   SER-199  10.7 10.9 8.2 2.5 47.9 49.2 123.3
 VAL-198   SER-199  10.7 10.9 8.2 2.5 47.9 49.2 123.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-198   SER-199  10.7 10.9 8.2 2.5 47.9 49.2 123.3
 VAL-198   SER-199  10.7 10.9 8.2 2.5 47.9 49.2 123.3
 SER-199   ILE-200  8.5 9.1 -8.6 0.9 148.6 136.7 -146.5
 ILE-200   ASN-201  10.4 11.4 -2.2 15.7 85.2 74.4 5.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-220   THR-221  6.7 6.4 -17.0 6.0 30.5 29.3 104.9
 THR-221   ARG-222  8.0 7.6 1.2 -1.7 143.2 144.6 18.7
 ARG-222   TRP-223  8.3 8.1 -4.0 7.5 74.9 72.2 17.7
 TRP-223   GLY-224  4.8 4.7 -9.1 14.8 82.8 88.1 -41.2
 TRP-223   GLY-224  4.8 4.7 -9.1 14.8 82.8 88.1 -41.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-223   GLY-224  4.8 4.7 -9.1 14.8 82.8 88.1 -41.2
 TRP-223   GLY-224  4.8 4.7 -9.1 14.8 82.8 88.1 -41.2
 GLY-224   TYR-225  4.0 3.4 -10.9 11.9 36.5 33.5 17.0
 TYR-225   GLU-226  2.8 2.2 -11.8 2.7 43.0 47.1 86.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees