Hypothetical Trna/rrna Methyltransferase Yjfh

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-75   PRO-76  14.1 14.2 27.5 7.7 159.8 161.7 -203.2
 PRO-76   GLY-77  14.9 14.4 -9.8 -14.7 51.0 52.8 101.0
 GLY-77   ARG-78  13.9 14.7 -12.7 -5.5 64.3 45.7 52.8
 ARG-78   GLN-79  10.6 11.8 -17.3 -4.0 43.4 31.5 83.1
 GLN-79   TYR-80  11.4 12.8 -27.2 40.4 40.7 42.7 -52.8
 TYR-80   GLN-81  10.0 11.1 7.6 -22.4 125.8 131.5 58.7
 GLN-81   GLU-82  9.9 10.3 -6.3 8.5 26.3 31.8 -13.9
 GLU-82   ASN-83  9.3 9.2 -6.1 4.8 85.1 93.4 -12.5
 ASN-83   ASP-84  5.7 5.6 -11.5 21.1 117.2 116.8 24.6
 ASP-84   LEU-85  5.5 6.2 -8.5 1.4 60.8 51.2 15.1
 LEU-85   PRO-86  7.8 8.0 0.6 0.1 108.2 106.4 -7.5
 PRO-86   ASP-87  6.1 5.9 -7.4 -2.6 137.3 132.2 -16.7
 ASP-87   LEU-88  6.4 6.8 22.7 -12.8 75.5 77.5 30.6
 LEU-88   ILE-89  9.5 10.0 1.1 -6.4 131.9 134.2 22.2

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees