Omp Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-2039   PHE-2040  10.9 10.9 -5.0 -1.9 63.9 62.3 47.3
 PHE-2040   ASN-2041  7.1 7.2 15.1 -39.1 119.3 109.0 131.4
 ASN-2041   THR-2042  8.5 8.1 19.6 4.0 142.8 153.2 -111.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-2121   LEU-2122  7.4 7.5 -5.1 14.7 120.1 116.3 33.5
 LEU-2122   VAL-2123  6.3 6.4 -1.5 7.1 125.0 131.7 47.8
 VAL-2123   ASP-2124  4.3 4.7 -8.5 -1.8 104.5 100.2 -5.7
 ASP-2124   ASP-2125  5.4 5.0 0.9 -15.2 63.5 65.1 -51.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-2149   VAL-2150  4.5 4.7 -3.8 8.4 126.1 128.5 3.6
 VAL-2150   LEU-2151  2.1 2.3 -6.7 26.1 127.2 131.3 121.6
 LEU-2151   ILE-2152  0.5 1.1 -2.6 1.5 125.1 115.3 -3.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-2166   ILE-2167  7.4 8.5 -1.6 -2.5 81.9 80.9 23.6
 ALA-2166   ILE-2167  8.8 9.5 -1.6 -2.5 88.3 85.4 15.7
 ILE-2167   GLN-2168  5.6 6.3 12.2 -12.5 25.0 28.5 -1.3
 ALA-2166   ILE-2167  7.4 8.5 -1.6 -2.5 81.9 80.9 23.6
 ALA-2166   ILE-2167  8.8 9.5 -1.6 -2.5 88.3 85.4 15.7
 ILE-2167   GLN-2168  5.6 6.3 12.2 -12.5 25.0 28.5 -1.3
 GLN-2168   GLU-2169  5.4 6.2 8.7 -4.6 63.1 55.5 18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-2172   ASP-2173  1.5 2.0 1.7 -3.1 99.8 102.9 -6.6
 ASP-2173   TYR-2174  4.8 4.8 17.5 -9.6 71.0 68.2 1.7
 TYR-2174   GLY-2175  5.4 4.7 -3.6 -2.9 88.8 86.4 -4.3
 GLY-2175   CYS-2176  4.2 3.3 -11.7 5.7 155.1 147.2 -32.6
 CYS-2176   LYS-2177  3.9 3.6 -0.5 7.7 104.4 108.2 13.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees