Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-230   ARG-231  12.3 12.7 11.7 3.0 56.3 61.2 95.5
 ARG-231   LEU-232  9.6 10.0 6.1 -3.2 28.3 28.1 0.2
 LEU-232   ASP-233  11.1 11.4 -16.4 10.7 82.6 81.6 -17.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-234   ARG-235  8.5 8.6 -12.7 4.9 53.9 51.5 17.9
 ARG-235   VAL-236  7.2 7.5 18.0 -10.1 100.1 105.5 90.1
 VAL-236   ILE-237  4.6 5.2 -7.3 0.4 135.1 126.6 -63.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-238   LEU-239  4.3 4.5 -20.3 12.8 139.6 140.1 -73.0
 LEU-239   ARG-240  3.5 3.6 9.2 -8.0 99.0 97.6 36.6
 ARG-240   THR-241  2.6 2.5 -9.6 -4.8 63.1 66.9 128.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-243   ASN-244  10.5 10.6 -17.7 12.1 40.0 38.2 47.9
 ASN-244   GLN-245  7.9 8.1 -1.0 -14.3 40.4 43.4 173.6
 GLN-245   ALA-246  7.2 7.0 55.9 -60.1 122.5 120.6 -14.6
 ALA-246   ILE-247  10.9 10.5 4.3 0.4 56.2 62.1 97.2
 ALA-246   ILE-247  10.9 10.5 4.3 0.4 56.2 62.1 97.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-246   ILE-247  10.9 10.5 4.3 0.4 56.2 62.1 97.2
 ALA-246   ILE-247  10.9 10.5 4.3 0.4 56.2 62.1 97.2
 ILE-247   PHE-248  11.1 11.3 15.2 -10.2 30.4 34.5 49.8
 PHE-248   ARG-249  8.3 8.4 -14.2 6.0 130.7 133.0 -66.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-375   GLU-376  18.7 18.4 -0.4 -4.2 104.6 104.0 -24.6
 GLU-376   ILE-377  15.6 15.4 22.4 -20.1 72.4 72.9 -62.5
 ILE-377   GLU-378  18.0 18.0 11.0 5.2 23.5 20.8 244.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-379   VAL-380  16.4 15.9 11.1 -6.4 100.7 95.5 15.7
 VAL-380   ARG-381  15.7 15.7 -0.6 4.2 61.4 59.1 -99.3
 ARG-381   LYS-382  19.3 19.4 -26.2 -11.1 5.1 11.3 492.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-552   LYS-553  23.6 24.1 8.5 -9.7 39.0 42.2 -18.1
 LYS-553   ARG-554  22.5 22.7 -72.5 84.5 93.4 82.7 13.0
 ARG-554   LEU-555  19.0 19.0 5.8 -12.4 146.8 150.8 58.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees