Atp Synthase Subunit Beta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-123   VAL-124  20.1 20.5 7.3 -19.2 104.7 98.1 -6.0
 VAL-124   GLU-125  21.4 21.6 0.8 9.2 101.4 106.5 -15.8
 GLU-125   MET-126  17.9 18.3 11.2 -48.0 37.2 52.0 -238.1
 GLU-129   GLN-130  17.3 16.9 70.6 -50.0 59.5 73.8 130.2
 GLN-130   GLU-131  14.9 14.4 56.7 -28.4 90.9 99.0 42.1
 GLU-131   ILE-132  14.2 13.9 50.6 -61.9 77.3 65.8 8.8
 ILE-132   LEU-133  12.5 12.5 1.0 -11.5 145.6 133.3 72.9
 LEU-133   VAL-134  11.0 11.2 0.5 -0.6 66.0 65.5 6.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-149   GLY-150  7.9 8.0 -15.5 -6.6 43.1 50.8 128.7
 GLY-150   LYS-151  6.1 6.1 1.1 6.9 82.8 81.5 -32.6
 LYS-151   ILE-152  3.2 3.3 -7.0 -0.4 34.7 31.7 37.6
 ILE-152   GLY-153  0.1 0.3 -2.2 -6.6 83.2 84.8 15.8
 GLY-153   LEU-154  3.4 3.4 15.9 -11.7 103.6 110.9 -21.3
 LEU-154   PHE-155  5.9 5.9 -2.6 -4.6 61.5 64.3 -32.9
 PHE-155   GLY-156  8.3 8.3 8.5 55.9 93.1 102.8 1.6
 GLY-156   GLY-157  12.0 11.8 -53.1 120.7 150.2 99.1 342.6
 GLY-157   ALA-158  14.6 15.4 -127.1 27.6 94.9 143.0 -335.4
 ALA-158   GLY-159  18.3 18.0 4.9 5.4 127.3 94.6 -33.1
 GLY-159   VAL-160  19.7 19.2 9.2 25.1 113.4 124.1 -132.2
 VAL-160   GLY-161  16.5 16.9 -41.1 62.4 133.0 121.5 161.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-171   ASN-172  14.3 14.7 -2.4 7.3 72.0 75.0 56.5
 ASN-172   VAL-173  14.5 15.0 -3.0 0.0 112.4 122.5 -59.1
 VAL-173   ALA-174  11.9 12.5 147.2 -119.1 21.7 23.1 272.7
 ALA-174   LYS-175  13.0 14.8 115.1 -97.7 90.8 100.8 43.1
 LYS-175   ALA-176  16.7 16.7 -98.2 74.7 70.2 102.2 -12.4
 ALA-176   HIS-177  16.8 16.9 -66.1 49.8 110.1 126.7 -90.5
 HIS-177   GLY-178  14.6 14.2 24.5 58.0 9.1 37.1 553.8
 GLY-178   GLY-179  14.0 13.4 -102.7 -139.9 99.2 81.0 -413.3
 GLY-179   TYR-180  10.3 11.7 -119.1 5.1 94.5 119.9 -421.3
 TYR-180   SER-181  8.0 8.5 -26.0 -16.1 51.3 48.9 200.6
 SER-181   VAL-182  6.0 6.4 -8.1 5.5 122.2 123.1 2.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-330   ALA-331  5.5 5.7 0.5 -6.5 56.8 53.5 -23.8
 ALA-331   THR-332  2.7 2.6 5.4 -9.7 86.8 90.7 38.7
 THR-332   THR-333  1.3 1.2 12.4 -10.6 88.9 80.3 14.5
 THR-333   VAL-334  5.1 5.0 1.8 -10.2 67.8 68.5 10.0
 VAL-334   LEU-335  7.1 7.0 -2.9 6.2 89.7 99.9 12.0
 LEU-335   SER-336  10.8 10.7 33.6 -22.8 46.6 45.8 25.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-351   ASP-352  6.5 6.3 47.4 -55.9 68.1 71.1 -79.0
 ASP-352   SER-353  4.4 4.0 37.5 -22.6 31.5 24.6 107.0
 SER-353   THR-354  4.2 3.6 11.9 -8.6 101.0 97.5 -5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-355   ARG-356  5.6 5.7 -5.5 6.7 105.6 99.4 31.6
 ARG-356   ILE-357  8.1 8.1 26.9 -70.5 96.0 92.4 82.8
 ILE-357   MET-358  10.6 10.4 58.2 -47.9 52.7 79.2 -36.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees