RNA Polymerase II Mediator Complex Subunit 18
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-69
VAL-70
6.4
6.6
5.0
-11.7
91.2
91.4
10.7
VAL-70
PRO-71
4.7
4.5
-16.8
8.3
129.3
134.5
-15.3
PRO-71
PHE-72
7.6
7.1
-0.2
0.6
154.9
147.4
2.4
PHE-72
SER-73
6.9
6.2
5.5
-7.9
68.8
74.6
11.5
SER-73
TYR-74
8.8
7.9
-4.4
3.3
82.8
73.4
0.4
TYR-74
LEU-75
6.5
5.8
-9.3
12.5
139.1
127.3
1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-93
THR-94
3.6
2.8
-110.9
28.1
81.8
44.0
94.0
THR-94
ASN-95
6.9
4.2
-57.4
41.0
117.1
74.9
1.8
SER-160
CYS-161
5.8
5.5
22.6
-23.8
149.9
150.4
4.8
CYS-161
SER-162
3.1
3.2
-13.8
16.9
63.4
60.3
-1.6
SER-162
PRO-163
5.0
5.2
-7.7
6.1
96.8
97.1
-1.0
PRO-163
TRP-164
7.1
7.3
3.5
1.2
125.1
123.3
-4.5
TRP-164
SER-165
7.1
7.2
11.3
-18.9
77.8
81.8
-8.5
SER-165
LEU-166
10.5
10.5
-33.9
28.3
107.8
105.0
-2.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees