Xanthine Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-76   VAL-77  14.0 14.2 -1.1 0.0 112.4 113.5 4.0
 VAL-77   PHE-78  10.8 11.0 3.0 -6.7 23.7 25.3 -0.9
 PHE-78   ALA-79  10.2 10.4 1.4 -1.2 72.7 71.0 -3.7
 ALA-79   ARG-80  6.8 6.9 -5.5 -11.9 148.8 148.8 -62.7
 ARG-80   LYS-81  7.0 7.3 13.4 29.8 48.4 55.7 104.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-106   ILE-107  1.8 1.4 -2.1 10.6 111.3 117.3 36.6
 ILE-107   ALA-108  1.4 2.0 5.2 -14.5 26.0 28.0 -51.0
 ALA-108   VAL-109  3.1 3.2 11.3 -2.5 50.1 50.7 39.2
 VAL-109   SER-110  4.5 4.9 -3.5 8.8 132.0 131.3 17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees