Serralysin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   THR-32  22.3 22.1 -5.1 7.8 124.0 125.6 142.4
 THR-32   VAL-33  19.5 19.4 2.3 0.0 60.7 60.3 -112.5
 VAL-33   ASP-34  16.7 16.7 -2.9 0.3 51.2 51.9 65.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-41   ARG-42  16.5 16.5 -2.1 -0.8 153.3 151.7 -107.4
 ARG-42   SER-43  18.8 18.8 5.5 -9.0 81.3 81.6 23.0
 SER-43   GLY-44  20.4 20.4 7.3 -6.2 66.3 68.3 101.1
 GLY-44   ALA-45  17.5 17.5 6.5 -3.9 127.4 127.2 -68.6
 ALA-45   SER-46  18.5 18.4 -0.1 1.4 49.5 50.8 -95.3
 SER-46   TRP-47  16.2 15.9 -11.6 7.5 102.1 102.0 -126.5
 SER-46   TRP-47  16.2 15.9 -11.6 7.5 102.1 102.0 -126.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-46   TRP-47  16.2 15.9 -11.6 7.5 102.1 102.0 -126.5
 SER-46   TRP-47  16.2 15.9 -11.6 7.5 102.1 102.0 -126.5
 TRP-47   HIS-48  16.1 16.2 -3.5 0.2 52.0 52.4 -50.7
 HIS-48   ASP-49  15.4 15.2 -0.2 -0.7 122.8 119.3 -48.6
 ASN-52   ASP-53  14.7 13.4 -166.3 40.4 127.1 141.4 -3771.0
 ASP-53   GLY-54  13.3 12.7 -15.1 -5.0 95.3 95.6 -136.2
 GLY-54   VAL-55  9.6 9.1 -10.0 11.3 133.3 136.6 -6.2
 VAL-55   ILE-56  9.7 9.4 2.8 -12.8 86.7 87.9 -24.7
 ILE-56   ASN-57  12.1 12.0 8.1 -8.6 19.6 14.6 -48.6
 ASN-57   LEU-58  14.2 13.9 0.5 6.8 78.9 80.4 -24.0
 LEU-58   THR-59  16.3 16.2 6.8 -1.4 18.1 20.8 250.4
 THR-59   TYR-60  18.6 18.6 -1.7 -0.8 100.3 98.1 21.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-174   LEU-175  19.8 19.9 3.9 0.1 59.0 62.2 42.1
 LEU-175   GLY-176  16.3 16.3 -2.9 6.5 164.7 166.4 137.3
 GLY-176   LEU-177  17.7 17.4 -8.0 4.4 100.1 97.9 58.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-178   HIS-179  21.6 21.4 -7.9 5.9 113.8 112.4 -15.5
 HIS-179   PRO-180  23.9 23.7 -3.8 9.7 43.7 40.8 -44.5
 PRO-180   GLY-181  23.5 23.6 -8.5 -1.6 38.9 36.3 348.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-198   GLU-199  28.1 27.9 -0.4 -3.7 30.0 29.0 160.9
 GLU-199   ASP-200  25.2 25.0 3.8 -4.4 112.9 112.6 -5.9
 ASP-200   THR-201  25.8 25.6 2.2 -5.7 153.4 151.9 55.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-229   ALA-230  17.3 17.2 -1.7 0.3 47.2 47.2 183.7
 ALA-230   PRO-231  14.6 14.6 0.8 3.8 159.4 158.6 -237.9
 PRO-231   LEU-232  14.3 14.3 -2.3 3.3 83.9 82.3 60.2
 LEU-232   LEU-233  16.1 16.2 -1.5 -1.6 33.3 33.5 84.1
 LEU-233   ASP-234  15.6 15.6 -1.4 3.2 33.6 33.5 -69.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-239   GLN-240  10.8 10.9 0.7 -1.2 105.8 106.1 120.4
 GLN-240   LYS-241  7.3 7.4 0.5 3.0 169.4 170.2 -144.6
 LYS-241   LEU-242  8.2 8.5 -10.8 11.4 79.9 83.1 -76.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-245   ASN-246  2.9 3.1 -10.9 11.0 51.9 49.6 65.9
 ASN-246   LEU-247  1.2 1.5 -0.7 3.6 68.0 69.5 -41.5
 LEU-247   GLU-248  2.7 2.5 -3.0 -3.1 32.4 31.1 353.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees