Chorismate Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-10   LEU-11  13.1 12.9 16.9 0.4 55.1 65.6 64.0
 LEU-11   ARG-12  9.6 9.3 -14.8 15.3 157.3 178.0 -32.1
 ARG-12   TYR-13  8.7 9.1 1.4 -14.3 82.4 81.1 74.8
 TYR-13   SER-14  5.2 5.5 -79.4 89.4 158.2 151.2 68.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-34   THR-35  5.8 5.3 32.4 13.1 1.0 16.3 287.5
 THR-35   LYS-36  6.4 6.6 -9.4 -12.5 113.7 116.2 -65.2
 LYS-36   ARG-37  9.4 9.5 9.3 0.2 93.6 97.9 54.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-127   PHE-128  12.1 12.3 4.6 -1.0 72.5 69.3 4.7
 PHE-128   ILE-129  8.3 8.6 -9.6 -9.4 40.8 39.4 67.8
 ILE-129   GLU-130  5.2 5.4 17.2 -12.3 60.1 57.9 16.5
 GLU-130   ILE-131  2.2 2.0 15.6 -22.1 51.3 43.3 16.5
 GLU-130   ILE-131  2.2 2.0 15.6 -22.1 51.3 43.3 16.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-130   ILE-131  2.2 2.0 15.6 -22.1 51.3 43.3 16.5
 GLU-130   ILE-131  2.2 2.0 15.6 -22.1 51.3 43.3 16.5
 ILE-131   GLY-132  1.5 1.4 4.8 -3.0 93.7 101.9 21.9
 GLY-132   ARG-133  4.9 4.6 26.0 0.6 67.8 58.8 52.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-157   LEU-158  4.9 4.3 -4.0 2.5 68.8 68.1 -13.0
 LEU-158   PRO-159  7.7 7.1 5.6 5.5 98.3 100.1 -17.9
 PRO-159   ALA-160  10.8 10.0 -13.3 1.9 40.7 46.9 50.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees