Transcriptional Activator Flhd

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-21   GLN-22  4.3 4.7 4.8 -8.7 52.8 53.1 -27.9
 GLN-22   ARG-23  1.0 1.3 16.1 -11.6 52.7 53.4 27.0
 ARG-23   LEU-24  4.5 4.5 8.5 -6.9 39.3 37.1 22.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-55   LYS-56  4.9 4.7 8.8 8.8 59.4 68.8 60.1
 LYS-56   LEU-57  8.0 7.8 -25.0 17.4 82.3 87.0 -28.2
 LEU-57   ALA-58  7.7 7.4 -4.6 -8.0 123.6 125.6 -73.2
 ALA-58   GLU-59  4.6 4.6 16.3 -7.8 12.5 8.1 68.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees