Photosystem II D1 Protease
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-246
ARG-247
6.7
6.4
-1.3
4.6
117.9
118.0
14.0
ARG-247
GLN-248
3.9
3.7
16.7
0.7
64.8
63.7
237.9
GLN-248
LYS-249
5.8
5.8
14.6
-9.6
38.6
48.9
-26.2
LYS-249
VAL-250
6.5
6.7
4.6
7.9
29.8
33.6
-97.1
VAL-250
THR-251
5.1
4.8
30.6
-39.7
44.4
43.5
100.3
THR-251
ILE-252
7.2
6.5
-42.6
42.4
143.0
150.0
-155.5
ILE-252
ASN-253
5.3
4.5
-23.8
24.3
143.4
140.6
-51.1
ASN-253
PRO-254
6.4
6.3
-16.5
18.8
122.1
127.5
166.8
PRO-254
VAL-255
6.2
6.1
-9.6
6.0
156.3
155.3
-78.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees