Cytochrome P450cam

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-86   PHE-87  17.4 17.8 -7.4 -18.5 133.4 139.7 -111.6
 PHE-87   ILE-88  19.3 19.1 27.2 0.1 94.5 87.5 -27.0
 ILE-88   PRO-89  22.8 22.6 21.2 9.1 48.7 66.7 -0.4
 PRO-89   ARG-90  24.9 25.0 3.5 -3.6 123.0 161.6 -4.6
 ARG-90   GLU-91  23.3 25.1 -3.4 12.5 102.5 62.8 -29.6
 GLU-91   ALA-92  24.6 24.9 -33.0 3.1 142.7 99.4 -110.4
 ALA-92   GLY-93  22.4 21.7 -30.6 59.1 76.2 60.7 -101.2
 GLY-93   GLU-94  19.5 20.3 -50.4 -102.4 48.4 13.9 793.8
 GLU-94   ALA-95  21.7 21.1 83.6 10.5 143.6 101.3 -318.5
 ALA-95   TYR-96  19.7 19.7 -51.7 -0.7 96.8 103.9 -64.7
 TYR-96   ASP-97  16.3 16.5 -29.4 18.9 30.3 42.3 45.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-98   ILE-99  10.3 10.7 -3.4 0.0 116.9 111.7 15.6
 ILE-99   PRO-100  7.2 7.4 -5.3 5.3 46.4 45.2 54.8
 PRO-100   THR-101  6.9 7.0 -20.1 -12.4 68.7 68.5 64.4
 THR-101   SER-102  10.1 10.1 17.0 4.0 53.2 55.6 41.6
 SER-102   MET-103  12.5 12.5 1.5 -14.3 43.7 39.0 -63.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-110   PHE-111  4.9 5.4 12.6 -10.4 47.1 55.5 7.4
 PHE-111   ARG-112  2.5 3.0 10.1 0.0 23.4 20.1 50.8
 ARG-112   ALA-113  4.5 4.4 8.1 2.7 85.5 85.0 17.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-117   VAL-118  7.4 6.3 11.0 -3.5 129.4 121.7 -34.4
 VAL-118   VAL-119  6.5 5.6 -1.1 -10.2 14.7 12.1 69.6
 VAL-119   GLY-120  4.9 4.0 12.2 -14.3 108.1 107.4 11.6
 GLY-120   MET-121  7.3 5.9 3.8 1.0 140.6 135.9 -33.4
 MET-121   PRO-122  10.0 8.7 0.5 3.0 90.1 84.0 -2.1
 PRO-122   VAL-123  12.5 11.1 -3.9 2.1 75.8 71.7 2.1
 VAL-123   VAL-124  10.4 9.4 1.3 0.5 165.9 173.2 -10.9
 VAL-124   ASP-125  9.0 8.3 4.9 -2.0 126.4 117.1 -13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-130   ILE-131  13.7 13.5 -0.8 4.2 67.5 57.2 -0.3
 ILE-131   GLN-132  10.0 9.9 -14.5 8.4 3.0 13.5 33.7
 GLN-132   GLU-133  10.8 11.2 -10.3 6.7 67.7 64.9 34.6
 GLU-133   LEU-134  13.7 14.0 -6.7 0.1 86.3 76.8 26.6
 LEU-134   ALA-135  12.1 12.5 -1.5 5.5 39.8 39.2 -20.6
 ALA-135   CYS-136  9.3 9.5 1.0 -2.7 150.6 150.6 9.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-156   PRO-157  11.1 11.1 -13.4 6.6 69.6 71.0 35.4
 PRO-157   PHE-158  12.0 12.3 -0.6 -6.1 70.6 79.4 6.7
 PHE-158   PRO-159  8.7 9.2 -3.4 -2.7 16.7 24.5 41.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-250   ASP-251  8.2 9.9 59.7 -77.2 130.0 122.3 58.9
 ASP-251   THR-252  10.2 10.3 82.3 -74.8 110.9 99.9 15.4
 THR-252   VAL-253  8.2 7.7 -22.3 5.9 40.0 30.2 69.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees