Replication Protein E1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-370   ALA-371  6.5 6.5 13.3 -8.6 72.4 75.0 38.8
 ALA-371   GLU-372  3.9 3.9 -5.5 0.9 114.6 121.4 -34.1
 GLU-372   THR-373  1.7 1.7 8.5 3.9 16.2 21.0 113.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees