Nuclease

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-139   VAL-140  26.3 25.3 -4.8 -4.0 92.7 94.5 -0.3
 VAL-140   SER-141  22.8 21.9 -16.2 -79.2 130.1 116.3 -38.4
 ASP-159   LEU-160  1.9 1.8 23.6 -3.2 56.7 54.2 7.0
 LEU-160   VAL-161  2.6 2.4 20.7 -13.9 102.2 98.5 -0.8
 VAL-161   MET-162  6.0 5.9 -12.3 6.8 105.6 104.7 -0.7

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees