Tyrosyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-108   GLN-109  6.0 5.6 -9.2 13.4 74.8 78.3 -28.5
 GLN-109   LEU-110  7.8 7.8 -1.2 -15.4 21.6 23.7 116.4
 LEU-110   ASP-111  8.6 8.5 8.6 -9.6 126.7 127.3 19.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-155   VAL-156  11.6 11.2 -18.2 31.6 81.7 84.7 21.1
 VAL-156   ASN-157  11.7 11.1 -41.9 -9.2 133.9 128.9 -353.7
 ASN-157   PRO-158  9.3 8.9 -161.1 -6.3 68.2 70.3 1103.5
 PRO-158   LEU-159  7.8 6.6 -24.9 14.8 92.8 51.9 13.9
 LEU-159   HIS-160  4.2 6.3 -31.2 9.9 42.6 118.9 -1027.1
 HIS-160   TYR-161  4.3 6.7 -25.3 55.1 43.8 115.0 685.9
 TYR-161   GLU-162  4.4 3.5 -50.6 -11.2 101.5 54.4 -845.4
 GLU-162   GLY-163  4.6 1.2 -135.8 -16.5 52.3 62.2 1055.6
 GLY-163   VAL-164  5.6 4.6 23.6 29.3 146.8 173.7 -524.4
 VAL-164   ASP-165  3.9 4.0 22.0 1.3 120.5 119.2 59.3
 ASP-165   VAL-166  6.2 6.6 6.5 4.3 120.4 125.1 -43.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-168   GLY-169  7.2 7.2 7.5 -12.3 110.8 110.4 43.8
 GLY-169   GLY-170  10.7 10.7 21.9 -32.4 43.0 44.9 -55.3
 GLY-170   MET-171  13.9 14.1 11.7 -6.9 98.3 94.4 -5.1
 MET-171   GLU-172  16.2 16.7 110.4 -114.5 140.0 145.9 32.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-188   VAL-189  9.5 10.0 14.5 -26.8 149.6 152.5 106.4
 VAL-189   CYS-190  9.5 9.7 -0.4 -2.2 87.7 88.7 -3.8
 CYS-190   ILE-191  9.9 10.0 15.4 -18.1 167.6 161.5 -4.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees