Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
7.4
6.3
18.5
-6.0
108.8
114.7
-28.6
LEU-108
GLY-109
4.2
2.9
-7.7
20.9
139.3
139.4
21.7
GLY-109
ILE-110
2.7
2.1
-54.7
28.9
62.9
69.8
39.7
ILE-110
SER-111
4.8
4.4
-5.0
-5.8
62.4
69.9
13.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
13.0
13.1
28.9
-33.5
97.2
89.6
-15.1
GLY-209
LEU-210
11.5
10.6
6.4
12.3
101.9
112.8
-22.9
LEU-210
ILE-211
8.0
7.2
-0.3
15.4
22.3
21.6
-36.6
ILE-211
ASP-212
7.2
7.2
-171.6
140.7
72.7
48.7
12.0
ASP-212
SER-213
4.1
4.0
128.6
-91.3
69.6
59.2
63.8
SER-213
LYS-214
4.5
3.3
-7.2
14.1
81.3
77.4
10.9
LYS-214
GLY-215
3.9
3.3
22.3
-14.5
37.4
40.4
16.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees