Adenovirus Fibre

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-377   GLY-378  10.2 10.2 8.9 -1.4 99.9 100.2 6.6
 GLY-378   ALA-379  10.4 10.2 -3.0 -9.3 100.3 106.8 -19.2
 ALA-379   GLY-380  9.4 9.2 0.6 10.0 94.8 100.0 44.8
 GLY-380   LEU-381  6.2 5.8 -9.7 9.0 117.9 116.9 40.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-383   ASP-384  6.0 6.1 -11.1 24.2 43.0 43.4 -181.7
 ASP-384   ASN-385  4.0 4.3 11.8 -35.0 139.3 147.3 370.5
 ASN-385   SER-386  5.6 5.8 47.0 -39.2 75.1 85.4 -78.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-391   GLY-392  0.7 0.8 -7.1 4.4 135.8 134.8 -25.1
 GLY-392   ASN-393  3.9 4.0 -13.3 15.5 113.4 118.8 63.1
 ASN-393   LYS-394  6.9 6.9 -38.6 42.6 133.2 130.0 127.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees