Transport Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-96
ILE-97
8.5
8.2
12.2
-10.9
41.4
42.8
-7.0
ILE-97
VAL-98
9.9
9.4
2.6
-0.7
100.9
94.3
2.2
VAL-98
PRO-99
8.8
8.6
4.5
3.6
51.5
60.3
50.7
PRO-99
GLN-100
12.4
12.2
-1.4
-11.9
112.8
121.1
-28.8
GLN-100
ASP-101
14.2
14.0
5.0
17.9
134.9
127.8
-91.1
ASP-101
THR-102
16.4
16.2
-18.3
29.4
26.1
22.9
-32.3
THR-102
ILE-103
15.2
14.4
4.8
7.4
129.4
131.6
-126.9
ILE-103
LEU-104
17.8
16.4
-6.1
-17.8
29.4
49.1
177.0
LEU-104
PHE-105
16.9
16.5
-7.6
-18.9
34.0
32.5
71.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-168
CYS-169
5.5
5.4
-4.2
9.2
66.5
69.6
21.2
CYS-169
LEU-170
4.3
4.6
-1.6
-2.1
100.3
105.8
37.2
LEU-170
LEU-171
0.7
1.2
5.4
9.8
21.7
22.2
165.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-179
ASP-180
7.3
7.7
14.7
-16.5
45.2
48.8
-19.0
ASP-180
GLU-181
10.3
10.6
-1.1
12.5
93.2
95.7
-36.3
GLU-181
ALA-182
9.7
10.3
-1.8
31.9
96.2
83.6
-3.0
ALA-182
THR-183
12.9
13.5
108.2
25.9
83.6
47.0
657.5
THR-183
SER-184
12.8
15.6
-16.9
55.6
121.7
79.5
-1029.4
ASP-187
SER-188
18.8
19.7
2.7
2.9
86.8
77.7
44.4
SER-188
LYS-189
16.2
17.9
-18.3
-0.6
35.5
46.4
50.7
LYS-189
THR-190
16.0
17.7
-13.8
-18.5
68.0
61.9
81.9
THR-190
GLU-191
14.0
15.6
24.5
-3.5
68.2
55.1
38.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-201
ARG-202
1.5
2.2
6.1
-10.4
117.3
121.6
16.1
ARG-202
LYS-203
4.0
3.6
14.6
-8.6
65.4
85.7
-44.5
LYS-203
ASN-204
7.0
7.1
10.8
4.5
64.4
55.4
77.2
ASN-204
ARG-205
9.4
9.4
-10.0
7.3
97.1
104.1
-19.7
ARG-205
THR-206
7.9
7.7
0.4
-2.7
158.0
151.2
19.1
THR-206
LEU-207
8.5
8.5
-3.0
9.2
91.1
91.7
24.4
LEU-207
ILE-208
5.7
5.9
-0.9
7.1
36.4
41.4
-32.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees