Hiv-1 Reverse Transcriptase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-425
TRP-426
5.9
6.6
-17.5
6.3
67.3
67.3
57.8
TRP-426
TYR-427
5.2
5.3
12.3
-27.6
171.6
172.2
98.0
TYR-427
GLN-428
4.2
4.4
0.0
-7.4
112.0
109.5
16.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-509
PRO-510
3.7
3.9
-11.5
-3.6
20.2
17.6
118.2
PRO-510
ASP-511
3.8
3.6
7.0
9.8
97.1
91.8
-55.0
ASP-511
GLN-512
1.9
1.6
-2.5
-9.8
45.9
56.5
48.1
GLN-512
SER-513
4.7
4.7
3.7
-5.4
81.5
96.6
-24.9
SER-513
GLU-514
8.2
8.1
-1.3
9.5
51.0
63.0
-61.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees