Immunoglobulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-105   ILE-106  4.8 4.6 -3.3 -31.9 8.7 17.1 46.8
 ILE-106   LYS-107  3.9 3.9 -9.0 -29.8 58.5 58.0 36.8
 LYS-107   ARG-108  2.4 1.8 -0.3 7.1 80.6 55.3 2.2
 ARG-108   THR-109  1.5 2.7 5.6 -17.1 116.6 126.9 3.8
 THR-109   VAL-110  4.9 4.3 38.9 1.1 51.3 56.8 31.1
 VAL-110   ALA-111  6.9 6.9 22.4 -33.7 72.2 79.1 -10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-164   GLU-165  7.2 6.8 51.5 -1.5 65.5 69.5 40.4
 GLU-165   GLN-166  3.5 3.4 35.3 19.0 66.6 30.1 50.4
 GLN-166   ASP-167  4.0 3.8 10.6 42.4 106.9 97.0 -12.4
 ASP-167   SER-168  5.7 7.5 17.7 -157.3 46.0 69.4 -115.1
 SER-168   LYS-169  7.7 9.2 -71.6 -55.7 144.3 137.7 284.8
 LYS-169   ASP-170  4.8 11.6 -86.4 5.6 166.9 148.7 -88.2
 ASP-170   SER-171  6.4 9.8 -44.1 -177.0 84.3 92.8 -68.8
 SER-171   THR-172  6.5 6.2 -177.3 47.4 104.5 91.3 -72.5
 THR-172   TYR-173  7.0 7.0 8.3 -12.5 154.1 154.4 0.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees