Udp-N-Acetylglucosamine-N-Acetylmuramyl- (Pentapeptide) Pyrophosphoryl-Undecaprenol N- Acetylglucosamine Transferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-160   ASN-161  3.0 3.1 -4.2 6.8 72.6 74.2 13.7
 ASN-161   PRO-162  1.9 2.3 -6.3 -2.9 93.0 88.9 14.4
 PRO-162   VAL-163  3.9 3.9 -11.2 19.9 160.5 153.7 85.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-338   ILE-339  5.5 5.6 6.5 12.1 22.8 18.9 187.1
 ILE-339   PRO-340  5.5 5.2 -21.0 13.6 100.4 101.6 2.2
 PRO-340   ASP-341  6.4 6.2 -3.4 5.2 153.0 155.9 24.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees