Tryptophanase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-16   GLU-17  11.1 9.8 3.3 -10.9 118.8 117.5 15.2
 GLU-17   PRO-18  10.0 9.1 5.5 -4.2 47.5 44.9 6.2
 PRO-18   VAL-19  13.0 12.0 6.3 2.2 73.7 77.6 19.0
 VAL-19   LYS-20  12.8 11.9 27.9 -29.5 57.2 61.5 28.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-52   ASP-53  7.6 8.7 2.4 7.9 80.2 73.1 14.2
 ASP-53   SER-54  5.6 6.8 -3.8 -1.2 150.3 158.8 -21.6
 SER-54   GLY-55  7.6 8.5 -0.7 5.8 139.2 138.5 23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-338   GLN-339  5.7 6.1 3.2 7.0 13.0 11.4 49.9
 GLN-339   TYR-340  7.3 7.8 -11.0 7.6 124.9 122.2 -23.0
 TYR-340   LEU-341  5.0 5.1 -4.6 0.0 94.6 96.5 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-350   VAL-351  8.6 9.0 -27.8 41.5 93.4 102.4 3.3
 GLN-353   GLN-354  15.6 13.6 -170.0 95.0 107.5 86.2 -30.1
 GLN-354   ALA-355  14.6 13.0 -6.4 110.3 114.7 153.9 307.6
 ALA-355   GLY-356  11.6 11.0 -2.7 42.8 104.8 134.3 95.4
 GLY-356   GLY-357  12.2 12.7 1.4 -19.4 46.3 49.2 -50.3
 GLY-357   HIS-358  11.4 12.0 -9.4 -35.9 137.2 119.4 -122.7
 HIS-358   ALA-359  11.0 9.3 40.8 -1.5 74.1 65.3 56.5
 HIS-358   ALA-359  11.0 9.3 40.8 -1.5 74.1 65.3 56.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-358   ALA-359  11.0 9.3 40.8 -1.5 74.1 65.3 56.5
 HIS-358   ALA-359  11.0 9.3 40.8 -1.5 74.1 65.3 56.5
 ALA-359   ALA-360  9.6 8.1 -10.5 24.9 167.3 165.1 66.2
 ALA-360   PHE-361  9.4 8.1 -1.7 3.1 87.6 89.0 -15.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-420   THR-421  7.8 7.9 -36.8 46.7 119.5 126.8 76.5
 THR-421   ILE-422  6.4 7.3 -33.3 24.9 99.0 104.5 7.0
 ILE-422   PRO-423  3.1 4.0 1.8 -4.1 28.4 26.8 -9.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-426   TYR-427  4.3 3.2 -0.5 2.2 135.9 135.5 1.9
 TYR-427   THR-428  4.9 3.9 1.1 2.4 49.2 50.5 9.7
 THR-428   GLN-429  7.2 6.3 1.2 -2.8 18.5 18.5 0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees