Skeletal Muscle Myosin II

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-707   ARG-708  56.6 56.5 -0.1 0.0 138.6 138.4 0.0
 ARG-708   LYS-709  56.8 56.8 0.1 -0.2 93.7 94.2 0.0
 LYS-709   GLY-710  58.0 57.9 37.1 -29.3 110.3 110.2 -2.4
 GLY-710   PHE-711  55.3 54.6 -0.1 0.0 126.4 131.5 0.0
 PHE-711   PRO-712  51.7 51.1 0.0 0.1 100.9 92.6 -0.1
 PRO-712   SER-713  51.3 50.7 -0.2 0.2 81.8 87.9 0.0
 SER-713   ARG-714  47.7 47.1 0.0 -0.1 64.2 61.7 0.2
 ARG-714   VAL-715  45.2 44.4 0.1 0.0 90.8 83.9 -0.1
 VAL-715   LEU-716  41.5 40.8 0.0 -0.2 45.1 45.9 0.0
 LEU-716   TYR-717  38.8 37.9 0.0 -0.1 55.4 54.6 0.0
 TYR-717   ALA-718  36.2 35.5 0.2 0.0 65.2 57.7 -0.1
 ALA-718   ASP-719  33.0 32.3 0.0 0.2 135.7 139.7 0.1
 ASP-719   PHE-720  35.3 34.7 -0.1 -0.1 144.5 136.0 0.0
 PHE-720   LYS-721  36.1 35.8 0.1 0.0 55.7 54.4 0.0
 LYS-721   GLN-722  32.7 32.5 0.0 0.1 131.6 140.1 0.0
 GLN-722   ARG-723  31.2 30.9 0.0 -0.1 32.4 34.5 0.0
 ARG-723   TYR-724  34.1 33.9 0.2 0.0 43.0 51.0 0.0
 TYR-724   ARG-725  34.5 34.7 0.1 -0.1 77.6 79.5 -0.1
 ARG-725   VAL-726  31.3 31.7 0.0 0.0 166.9 162.6 0.0
 VAL-726   LEU-727  30.8 31.4 0.1 0.2 54.6 63.0 0.0
 LEU-727   ASN-728  33.9 34.8 -0.2 0.2 106.4 101.3 0.1
 ASN-728   ALA-729  32.6 33.8 -0.1 0.0 60.4 65.5 -0.1
 ALA-729   SER-730  29.4 30.4 0.1 0.1 121.0 122.2 0.0
 SER-730   ALA-731  27.9 29.1 0.0 0.0 142.8 151.4 0.0
 ALA-731   ILE-732  30.9 31.9 -0.1 0.1 47.2 49.1 0.0
 ILE-732   PRO-733  32.0 32.6 -0.1 0.0 54.7 62.7 0.1
 PRO-733   GLU-734  28.4 28.9 0.1 0.0 133.2 136.2 0.0
 GLU-734   GLY-735  27.9 28.4 0.0 -0.1 140.8 146.9 0.0
 GLY-735   GLN-736  31.2 31.4 0.0 0.0 132.7 125.7 0.0
 GLN-736   PHE-737  30.5 30.3 0.1 0.0 125.5 119.4 0.0
 PHE-737   MET-738  26.9 26.7 -0.1 0.1 49.0 43.3 0.0
 MET-738   ASP-739  27.8 27.6 0.1 0.0 142.8 148.2 0.0
 ASP-739   SER-740  30.5 29.9 0.1 0.0 80.1 78.1 0.0
 SER-740   LYS-741  31.2 30.5 -0.1 0.1 103.4 97.4 0.1
 LYS-741   LYS-742  34.8 34.1 0.1 0.0 48.1 55.3 -0.1
 LYS-742   ALA-743  34.9 34.5 0.1 -0.1 17.6 9.0 0.1
 ALA-743   SER-744  33.1 33.0 0.0 0.2 122.8 119.1 0.0
 SER-744   GLU-745  35.9 35.8 -0.2 0.2 103.2 94.7 0.0
 GLU-745   LYS-746  38.0 38.0 -0.1 0.2 149.8 146.9 0.1
 LYS-746   LEU-747  36.0 36.4 -0.1 0.1 146.9 151.5 0.0
 LEU-747   LEU-748  35.6 36.1 0.0 0.1 121.5 115.0 0.0
 LEU-748   GLY-749  39.2 39.7 -0.1 0.0 120.2 113.0 -0.1
 GLY-749   GLY-750  39.0 39.8 0.0 0.0 14.3 15.6 0.0
 GLY-750   GLY-751  38.4 39.6 0.1 0.0 79.5 79.0 0.1
 GLY-751   ASP-752  40.4 41.7 0.0 0.0 72.8 80.7 -0.1
 ASP-752   VAL-753  43.6 45.1 0.1 -0.1 118.7 119.9 0.0
 VAL-753   ASP-754  45.2 46.2 -0.1 0.1 56.9 48.3 0.0
 ASP-754   HIS-755  48.4 49.2 -0.1 0.1 24.4 27.5 0.0
 HIS-755   THR-756  47.1 47.7 -0.1 0.1 39.0 33.6 -0.1
 THR-756   GLN-757  50.3 50.6 0.0 0.1 61.9 68.6 0.0
 GLN-757   TYR-758  50.1 50.2 0.0 0.0 43.4 51.3 0.0
 TYR-758   ALA-759  47.4 47.2 0.0 -0.1 38.1 31.4 0.1
 ALA-759   PHE-760  46.8 46.4 0.0 0.0 53.4 61.2 0.0
 PHE-760   GLY-761  43.9 43.2 0.1 -0.2 167.1 174.3 0.0
 GLY-761   HIS-762  43.4 42.3 0.0 0.0 65.6 73.4 0.0
 HIS-762   THR-763  40.8 39.4 0.0 0.1 100.1 108.6 0.0
 VAL-765   PHE-766  43.0 42.4 0.0 0.0 95.6 94.8 0.0
 PHE-766   PHE-767  46.4 45.8 0.1 -0.1 13.9 22.2 0.0
 ALA-769   GLY-770  51.5 51.5 73.9 -120.0 27.9 27.3 24.7
 GLY-770   LEU-771  49.8 50.7 -0.1 0.0 111.7 104.8 -0.1
 LEU-771   LEU-772  47.0 47.4 0.0 0.1 97.4 114.2 0.0
 LEU-772   GLY-773  44.4 45.7 0.0 0.0 125.8 115.5 0.1
 GLY-773   LEU-774  45.8 47.4 0.1 -0.2 29.0 38.8 -0.1
 LEU-774   LEU-775  44.8 45.3 0.0 0.1 87.5 73.8 0.0
 LEU-775   GLU-776  41.3 42.2 -0.1 0.0 99.8 84.8 0.0
 GLU-776   GLU-777  40.5 42.6 0.1 -0.1 21.0 35.1 0.0
 GLU-777   MET-778  41.7 43.3 0.1 -0.1 57.3 67.4 -0.1
 MET-778   ARG-779  39.1 39.9 0.1 0.0 108.3 125.0 0.1
 ARG-779   ASP-780  36.7 38.6 0.0 -0.1 111.8 99.9 0.1
 ASP-780   ASP-781  38.0 40.7 0.0 0.0 151.3 136.1 -0.1
 LEU-783   ALA-784  32.8 36.3 -0.1 -0.1 134.4 121.3 0.0
 ALA-784   GLU-785  34.0 37.7 0.1 -0.2 64.1 74.8 0.0
 GLU-785   ILE-786  30.9 34.1 13.0 -2.3 123.9 140.3 -29.8
 ILE-786   ILE-787  28.8 32.9 -18.9 25.1 96.6 82.9 -9.0
 ILE-787   THR-788  27.6 31.0 0.1 0.1 29.7 42.5 0.1
 THR-788   ALA-789  27.1 29.8 0.0 -0.1 99.9 87.0 -0.1
 ALA-789   THR-790  25.3 28.4 -0.1 0.0 53.6 42.8 0.1
 THR-790   GLN-791  23.2 26.9 0.1 -0.1 73.3 76.0 0.0
 GLN-791   ALA-792  22.5 25.4 0.2 -0.2 50.2 63.9 -0.1
 ALA-792   ARG-793  21.0 23.5 0.2 -0.1 104.8 118.5 -0.1
 ARG-793   CYS-794  18.4 21.7 -0.1 0.0 71.2 67.3 0.1
 CYS-794   ARG-795  17.3 20.5 0.1 0.0 41.2 46.6 0.0
 ARG-795   GLY-796  17.5 19.7 -0.2 0.2 117.3 103.8 0.0
 GLY-796   PHE-797  15.4 17.8 -0.1 0.0 59.5 47.6 0.1
 PHE-797   LEU-798  13.0 16.2 -0.1 -0.1 84.9 83.8 0.0
 LEU-798   MET-799  13.1 15.5 0.1 0.0 45.6 56.7 -0.1
 MET-799   ARG-800  11.7 13.2 -0.1 0.0 92.1 79.4 0.0
 ARG-800   VAL-801  9.2 11.9 0.0 0.0 60.0 50.0 0.0
 VAL-801   GLU-802  7.4 9.9 -0.1 0.2 118.7 115.2 0.0
 GLU-802   TYR-803  8.5 9.1 -0.2 0.2 132.1 118.4 0.0
 TYR-803   ARG-804  5.9 6.9 -0.1 0.1 62.4 48.8 0.0
 ARG-804   ALA-805  3.1 5.2 -0.1 -0.1 77.5 74.2 0.0
 ALA-805   MET-806  5.8 4.8 -54.2 72.0 149.2 141.7 106.0
 MET-806   VAL-807  5.3 4.5 -140.6 147.7 98.0 93.5 9.8
 VAL-807   GLU-808  1.8 1.7 0.0 0.1 136.6 136.6 0.1
 GLU-808   ARG-809  1.0 1.1 -0.1 0.1 103.2 103.3 -0.1

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees