Glutamyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-251   SER-252  5.7 5.6 -1.2 4.6 62.8 62.9 -41.6
 SER-252   LEU-253  7.8 7.8 5.8 -9.2 174.2 173.1 58.7
 LEU-253   ASP-254  7.0 7.0 0.4 -2.1 118.9 118.1 21.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-265   LEU-266  3.6 3.5 -3.0 0.2 14.5 14.4 63.1
 LEU-266   ARG-267  2.9 2.8 1.3 -2.2 99.7 98.2 -19.9
 ARG-267   ASN-268  1.5 1.3 5.9 -3.9 79.3 76.5 40.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-304   PHE-305  10.9 10.8 5.0 -2.8 146.7 146.3 -42.6
 PHE-305   ASP-306  8.7 8.6 -5.4 9.6 74.9 74.3 8.7
 ASP-306   LEU-307  11.5 11.4 4.2 -9.0 134.6 129.5 108.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees