Hemolin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-208   TYR-209  22.6 22.1 10.8 23.1 20.1 15.3 389.5
 TYR-209   LYS-210  20.2 19.9 6.1 23.8 86.3 69.0 -3.1
 LYS-210   GLY-211  21.8 21.9 -50.3 17.0 118.0 105.8 -200.7
 GLY-211   GLU-212  19.1 19.1 6.0 -0.9 8.9 8.7 56.0
 GLU-212   PRO-213  19.5 19.5 1.1 0.3 74.2 73.8 22.7
 PRO-213   VAL-214  16.2 16.2 -1.9 -0.9 106.2 105.2 -22.2
 VAL-214   PRO-215  14.8 14.7 -1.1 6.0 110.9 110.4 -16.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-295   PRO-296  23.5 23.4 0.4 -5.9 104.8 104.1 50.1
 PRO-296   GLN-297  20.8 20.7 2.7 -0.3 115.8 116.9 1.9
 GLN-297   LYS-298  17.7 17.7 0.6 -0.4 144.4 143.7 -0.1
 LYS-298   HIS-299  16.0 16.0 0.6 3.2 99.7 99.9 -8.4
 HIS-299   SER-300  12.8 12.8 0.0 13.3 148.4 150.3 -181.7
 SER-300   LEU-301  11.1 11.3 -36.4 37.7 84.9 85.5 13.6
 LEU-301   LYS-302  8.3 7.8 -18.8 0.3 28.7 24.4 233.2
 LYS-302   LEU-303  6.4 6.2 -2.6 1.0 94.7 94.0 4.3
 LEU-303   THR-304  2.7 2.5 -0.2 -0.1 23.0 23.1 7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees