Udp-N-Acetylglucosamine Pyrophosphorylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-18   MET-19  9.2 8.8 5.6 2.6 107.1 107.1 -40.6
 MET-19   TYR-20  5.8 5.3 -9.1 1.0 0.3 0.3 78.7
 TYR-20   SER-21  6.6 6.0 7.6 -12.1 115.3 112.6 19.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-26   LEU-27  3.7 3.6 11.3 -9.5 61.4 64.9 -19.0
 LEU-27   HIS-28  5.4 5.5 -4.6 3.5 108.5 107.8 14.0
 HIS-28   THR-29  3.6 4.1 -9.5 10.7 52.9 48.6 15.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-37   HIS-38  10.0 9.9 -0.8 -1.9 143.0 144.6 -18.9
 HIS-38   VAL-39  8.9 9.1 7.3 -1.6 33.0 33.3 59.5
 VAL-39   ILE-40  7.5 7.5 -7.3 0.6 103.6 104.3 -11.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-53   VAL-54  5.7 5.9 8.8 -7.5 45.6 44.8 1.7
 VAL-54   TYR-55  3.8 3.7 -4.7 8.7 114.2 113.2 18.4
 TYR-55   GLY-56  1.3 1.4 -8.3 57.9 140.0 138.1 255.8
 GLY-56   HIS-57  1.4 1.3 -33.7 -18.8 118.5 137.2 -179.4
 LEU-53   VAL-54  13.5 12.8 8.8 -7.5 116.7 111.1 -2.4
 VAL-54   TYR-55  13.6 13.0 -4.7 8.7 28.2 34.2 -46.0
 TYR-55   GLY-56  13.1 12.4 -8.3 57.9 61.1 65.7 -322.6
 GLY-56   HIS-57  14.2 13.4 -33.7 -18.8 22.8 23.5 601.6
 HIS-57   GLY-58  12.1 13.1 54.6 5.9 108.4 99.3 -208.7
 LEU-53   VAL-54  5.7 5.9 8.8 -7.5 45.6 44.8 1.7
 VAL-54   TYR-55  3.8 3.7 -4.7 8.7 114.2 113.2 18.4
 TYR-55   GLY-56  1.3 1.4 -8.3 57.9 140.0 138.1 255.8
 GLY-56   HIS-57  1.4 1.3 -33.7 -18.8 118.5 137.2 -179.4
 LEU-53   VAL-54  13.5 12.8 8.8 -7.5 116.7 111.1 -2.4
 VAL-54   TYR-55  13.6 13.0 -4.7 8.7 28.2 34.2 -46.0
 TYR-55   GLY-56  13.1 12.4 -8.3 57.9 61.1 65.7 -322.6
 GLY-56   HIS-57  14.2 13.4 -33.7 -18.8 22.8 23.5 601.6
 HIS-57   GLY-58  12.1 13.1 54.6 5.9 108.4 99.3 -208.7
 GLY-58   GLY-59  11.2 11.5 -14.5 2.6 117.4 118.0 -73.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-223   GLU-224  4.9 4.3 7.6 3.3 44.3 40.1 143.7
 GLU-224   GLY-225  6.5 6.0 -12.0 5.5 132.1 132.5 -76.1
 GLY-225   VAL-226  4.7 4.2 -15.0 16.8 159.6 152.4 41.7
 VAL-226   ASN-227  4.7 4.5 17.3 -12.2 60.6 57.4 8.0
 ASN-227   ASN-228  6.5 6.1 -1.6 2.4 160.6 157.1 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees