Spike Glycoprotein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-328
PHE-329
5.5
4.8
-10.0
-33.5
159.2
172.8
-143.6
PHE-329
ASN-330
6.8
5.4
93.4
-58.2
68.4
75.9
118.0
ASN-330
ALA-331
10.3
9.0
1.9
-13.9
92.1
101.1
47.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-341
ARG-342
7.9
7.4
-1.7
-7.1
108.4
109.0
-19.5
ARG-342
LYS-343
5.5
5.6
-19.3
25.7
132.3
137.4
1.1
LYS-343
LYS-344
3.0
2.7
-5.7
3.9
112.9
124.9
18.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-362
THR-363
6.7
6.5
1.2
11.0
103.3
97.0
-21.4
THR-363
PHE-364
6.6
7.3
155.1
-166.8
157.4
129.0
32.5
PHE-364
LYS-365
8.9
9.2
-34.3
14.9
85.9
95.2
14.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees