Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-270   THR-271  1.2 1.2 0.8 -2.4 96.6 94.0 -54.7
 THR-271   PHE-272  2.4 2.4 -2.1 9.2 142.8 141.1 97.9
 PHE-272   ALA-273  5.2 5.3 -1.2 -5.6 84.3 87.1 -18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-277   ARG-278  9.7 9.6 -0.7 -5.3 56.0 60.0 117.7
 ARG-278   TYR-279  9.0 9.1 13.2 -11.7 173.8 171.9 -56.5
 TYR-279   GLY-280  7.7 7.8 -0.1 -4.4 63.5 67.2 17.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-282   LYS-283  4.8 4.6 3.7 5.4 65.4 62.9 132.4
 LYS-283   PRO-284  2.3 2.1 -7.7 5.2 106.2 102.0 -25.7
 PRO-284   ASP-285  2.0 2.1 -10.7 3.1 118.5 118.7 -39.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-286   ARG-287  6.8 7.1 -6.2 7.0 58.3 59.3 1.5
 ARG-287   ASN-288  9.1 9.5 2.1 0.3 104.0 102.8 17.0
 ASN-288   PRO-289  9.6 9.9 -2.0 6.5 151.7 147.6 90.1
 PRO-289   MET-290  12.2 12.7 2.4 -11.8 106.7 106.1 44.3
 PRO-289   MET-290  12.2 12.7 2.4 -11.8 106.7 106.1 44.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-289   MET-290  12.2 12.7 2.4 -11.8 106.7 106.1 44.3
 PRO-289   MET-290  12.2 12.7 2.4 -11.8 106.7 106.1 44.3
 MET-290   GLU-291  12.7 12.8 12.3 -31.1 130.5 126.8 265.7
 GLU-291   LEU-292  11.9 11.6 -14.9 25.2 90.9 76.7 -104.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-322   VAL-323  18.5 18.6 -13.7 8.6 40.7 45.2 88.1
 VAL-323   PRO-324  18.2 18.0 8.0 -3.2 97.7 98.2 -35.3
 PRO-324   GLY-325  20.1 20.1 5.2 -7.0 160.4 159.8 26.1
 GLY-325   GLY-326  22.5 22.6 13.4 -12.6 123.5 126.6 -16.7
 GLY-326   ALA-327  21.3 21.3 15.7 -12.4 104.9 106.0 -37.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-414   LYS-415  11.4 11.4 -6.9 0.6 35.2 37.6 105.7
 LYS-415   ASP-416  9.9 10.0 4.6 -4.7 131.2 135.8 -61.9
 ASP-416   LEU-417  12.5 12.4 -7.8 19.2 97.7 102.1 34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-423   LYS-424  14.0 15.0 33.8 -82.7 148.1 140.1 870.3
 LYS-424   TRP-425  13.2 13.9 27.6 4.7 94.8 101.4 -302.8
 TRP-425   ALA-426  11.6 11.8 10.6 -1.8 148.6 147.5 -181.2
 ALA-426   PRO-427  8.8 9.0 -5.2 8.9 69.4 68.1 -59.5
 PRO-427   LEU-428  8.3 8.6 -1.9 -7.5 28.3 31.2 155.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-539   MET-540  14.3 14.4 -3.4 8.6 123.9 121.5 10.7
 MET-540   LEU-541  10.9 11.0 -4.7 -2.2 65.7 67.6 43.7
 LEU-541   LEU-542  10.5 10.7 13.3 -15.3 80.2 83.9 -52.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-544   THR-545  11.2 11.7 -9.9 6.4 47.5 54.2 74.5
 THR-545   ASP-546  8.7 9.0 21.2 -27.2 55.4 56.7 -17.0
 ASP-546   ASN-547  5.2 5.4 -0.2 3.5 69.5 66.1 47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees