Probable Regulatory Protein Embr

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-57   ALA-58  6.3 6.1 1.6 -3.8 100.1 100.3 4.2
 ALA-58   LEU-59  3.0 3.0 -3.6 7.0 144.1 144.1 12.7
 LEU-59   TRP-60  1.3 1.2 -3.3 3.2 136.3 136.4 -3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-64   PRO-65  6.4 6.1 -9.2 -1.9 18.0 21.8 103.5
 PRO-65   SER-66  5.9 5.6 -3.6 0.5 93.5 93.8 -9.0
 SER-66   GLY-67  9.2 8.9 2.9 -0.6 69.3 70.7 24.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-69   ALA-70  10.6 10.2 -1.3 5.3 104.9 107.1 1.9
 ALA-70   SER-71  11.5 11.2 -4.1 1.5 77.6 76.7 15.1
 SER-71   ILE-72  8.4 8.2 1.1 -1.9 162.7 164.2 1.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-73   SER-74  12.6 12.4 -0.6 -0.3 73.7 72.7 3.5
 SER-74   TYR-75  12.2 12.1 -0.8 0.2 132.0 130.2 -12.6
 TYR-75   VAL-76  10.3 10.2 2.5 -0.2 38.9 37.0 24.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-155   PHE-156  10.4 10.6 5.2 -13.0 94.7 98.2 10.7
 PHE-156   GLN-157  7.0 7.3 -2.6 -4.4 43.1 41.8 77.5
 GLN-157   PHE-158  8.4 8.7 0.4 3.5 160.0 156.9 -65.2
 PHE-158   VAL-159  6.0 6.1 -4.7 4.4 56.6 55.8 -61.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-270   ALA-271  12.3 12.4 -0.4 2.1 64.0 65.7 25.4
 ALA-271   GLY-272  10.2 10.2 -1.3 0.7 117.9 121.7 -10.4
 GLY-272   THR-273  10.6 10.6 -7.6 7.4 141.4 141.6 -4.8
 THR-273   VAL-274  8.9 9.1 -0.8 -2.1 75.3 75.7 53.5
 VAL-274   THR-275  6.1 6.3 4.1 -4.3 93.0 92.1 -40.9
 THR-275   VAL-276  5.6 5.7 4.7 5.2 28.8 25.0 128.1
 VAL-276   LEU-277  5.7 5.9 -6.6 4.3 109.0 105.9 -32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-334   THR-335  4.0 3.9 -4.4 1.5 80.8 78.5 46.6
 THR-335   GLY-336  4.9 4.9 4.3 -2.1 56.0 58.8 -1.5
 GLY-336   THR-337  3.3 3.4 4.0 -7.6 30.9 28.2 -31.7
 THR-337   ASN-338  5.6 5.5 -5.1 0.4 96.8 100.1 4.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees