Diol Dehydratase-Reactivating Factor Large Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-461   LYS-462  5.3 5.6 3.9 -3.2 64.3 66.6 -0.3
 LYS-462   LYS-463  4.1 3.9 0.7 5.4 97.4 99.3 -9.8
 LYS-463   TYR-464  0.5 1.1 7.5 -14.4 149.2 148.7 58.9
 TYR-464   PRO-465  1.5 1.7 13.7 -10.7 144.0 141.4 -25.5
 PRO-465   LEU-466  0.6 0.3 4.5 -5.7 126.7 127.5 18.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-511   LEU-512  15.7 16.5 -54.8 -1.5 86.2 73.6 54.8
 LEU-512   ALA-513  13.9 13.5 -13.3 -29.7 120.9 133.8 -137.7
 ALA-513   LEU-514  11.5 11.6 -10.7 -1.2 46.9 64.5 63.5
 LEU-514   GLU-515  8.1 8.0 -7.1 -0.3 63.1 72.3 21.0
 GLU-515   LYS-516  10.0 9.6 2.4 -8.2 136.3 141.1 28.6
 LYS-516   VAL-517  12.6 12.2 4.3 -1.4 147.2 149.0 -15.5
 VAL-517   ARG-518  10.2 9.7 -1.7 0.7 65.0 71.9 5.6
 ARG-518   ALA-519  8.5 7.8 -6.8 7.0 59.3 61.7 -4.3
 ALA-519   ILE-520  12.1 11.3 -6.4 1.6 28.2 20.7 28.4
 ILE-520   ARG-521  12.4 11.8 3.1 -0.1 130.9 129.7 -12.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees