Grancalcin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-137   THR-138  10.4 11.5 -84.8 1.4 89.2 86.1 8.6
 THR-138   VAL-139  7.8 8.1 -22.1 20.0 84.4 88.8 85.3
 VAL-139   GLU-140  8.3 7.5 -58.9 9.8 37.1 37.6 419.6
 GLU-140   HIS-141  8.0 7.9 -5.9 21.3 103.1 102.9 -13.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-164   LYS-165  6.7 6.4 -2.1 4.3 130.1 122.8 20.0
 LYS-165   ARG-166  6.6 6.6 -14.8 6.1 66.1 54.9 5.3
 ARG-166   TYR-167  6.8 6.9 -5.5 -5.9 79.5 71.5 -5.4
 TYR-167   SER-168  3.2 3.4 14.1 -33.3 44.2 53.6 -152.9
 SER-168   LYS-169  1.5 1.2 21.2 9.0 55.9 52.4 203.3
 LYS-169   ASN-170  2.0 2.1 -2.8 2.1 123.3 132.9 -26.4
 ASN-170   GLY-171  2.8 1.9 5.6 6.9 108.0 105.4 -33.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-179   ALA-180  1.4 1.0 -0.7 -1.6 95.6 94.4 -3.1
 ALA-180   CYS-181  2.6 2.8 5.1 -6.2 98.0 100.2 -4.3
 CYS-181   CYS-182  4.6 4.3 -2.8 4.3 142.5 141.4 8.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees