Aspartate Aminotransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-8   SER-9  17.9 18.0 -6.2 6.6 100.1 101.0 -2.8
 SER-9   VAL-10  14.1 14.2 -7.0 14.8 153.0 154.8 113.5
 VAL-10   SER-11  13.9 14.0 12.4 -9.1 44.8 50.6 48.2
 SER-11   PRO-12  13.0 12.9 -5.8 4.9 145.2 145.9 -60.9
 PRO-12   SER-13  15.2 15.2 12.1 -0.8 37.9 39.6 139.0
 SER-13   MET-14  13.7 13.7 0.4 27.3 55.1 66.9 249.0
 MET-14   THR-15  12.6 12.1 -28.2 7.5 156.3 172.4 -387.0
 THR-15   LEU-16  11.9 12.6 54.4 -5.0 59.6 74.4 360.1
 LEU-16   ILE-17  15.5 16.4 -52.8 22.2 126.2 142.5 -459.4
 ILE-17   ILE-18  16.0 17.4 -15.1 34.8 155.9 151.3 308.8
 ILE-18   ASP-19  13.4 14.7 27.7 -16.2 72.1 67.9 159.2
 ASP-19   ALA-20  13.4 15.4 -9.6 23.0 103.9 114.2 70.4
 ALA-20   LYS-21  17.1 19.0 -9.3 7.1 138.9 151.5 -53.3
 LYS-21   ALA-22  17.3 18.3 4.0 -12.4 27.3 42.6 -115.5
 ALA-22   LYS-23  15.0 16.1 -5.3 4.7 110.3 105.7 -46.3
 LYS-23   ALA-24  17.8 19.1 4.3 -3.3 66.9 53.2 -21.1
 ALA-24   MET-25  20.5 21.4 -8.2 12.6 152.4 158.7 51.2
 MET-25   LYS-26  18.7 19.2 0.6 -6.5 43.8 54.5 -61.7
 LYS-26   ALA-27  18.0 19.0 4.0 12.0 73.8 75.8 57.8
 ALA-27   GLU-28  21.8 22.8 -23.1 22.7 118.3 141.6 61.2
 GLU-28   GLY-29  22.5 22.9 -19.4 -5.9 157.6 147.4 -474.2
 GLY-29   ILE-30  20.5 20.6 33.4 -6.2 85.7 78.9 150.7
 ILE-30   ASP-31  17.5 17.7 10.6 -2.0 89.7 89.3 48.9
 ASP-31   VAL-32  14.1 14.3 4.2 -9.0 136.5 136.4 77.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-33   SER-34  9.1 9.3 19.8 -19.9 8.9 8.2 4.9
 SER-34   PHE-35  9.9 9.7 10.9 -4.1 70.3 71.7 31.4
 PHE-35   SER-36  7.4 7.4 3.4 8.7 10.0 8.1 238.2
 SER-36   ALA-37  9.0 9.0 -6.9 14.1 115.4 113.1 20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-337   PHE-338  13.0 13.0 10.7 -9.2 32.0 32.0 45.6
 PHE-338   CYS-339  10.3 10.4 4.6 -4.2 66.1 62.0 0.2
 CYS-339   SER-340  9.0 9.0 -3.2 -5.0 107.6 108.5 -76.9
 SER-340   GLU-341  12.8 12.8 12.0 2.0 21.4 32.4 263.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-352   GLY-353  6.2 6.0 3.2 0.6 44.2 41.4 75.1
 GLY-353   ALA-354  3.2 3.1 1.3 3.3 22.3 22.8 79.8
 ALA-354   ALA-355  5.7 5.6 -3.8 0.8 117.1 116.3 -45.1
 ALA-355   PHE-356  6.4 6.3 -0.2 0.4 60.2 62.4 -5.5
 ALA-355   PHE-356  6.4 6.3 -0.2 0.4 60.2 62.4 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-355   PHE-356  6.4 6.3 -0.2 0.4 60.2 62.4 -5.5
 ALA-355   PHE-356  6.4 6.3 -0.2 0.4 60.2 62.4 -5.5
 PHE-356   GLY-357  3.5 3.3 -3.1 -0.5 52.7 52.0 48.1
 GLY-357   ALA-358  2.4 2.1 8.9 -2.9 63.7 63.6 47.5
 ALA-358   ASP-359  3.1 3.1 -0.4 0.1 44.0 49.3 69.3
 ALA-358   ASP-359  3.1 3.1 -0.4 0.1 44.0 49.3 69.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-358   ASP-359  3.1 3.1 -0.4 0.1 44.0 49.3 69.3
 ALA-358   ASP-359  3.1 3.1 -0.4 0.1 44.0 49.3 69.3
 ASP-359   ASP-360  6.3 6.3 0.9 -7.8 139.7 142.7 113.0
 ASP-360   CYS-361  7.0 7.2 4.9 2.7 133.2 132.7 -109.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-364   SER-365  3.9 4.0 3.7 0.3 91.5 89.4 -31.0
 SER-365   TYR-366  7.6 7.6 5.3 0.6 16.2 13.4 106.5
 TYR-366   ALA-367  8.9 8.8 -5.7 -1.9 99.5 97.5 21.0
 ALA-367   THR-368  12.3 12.2 3.5 -4.3 44.3 51.6 2.8
 THR-368   ASP-369  12.1 12.1 0.4 2.0 33.1 27.7 35.2
 ASP-369   LEU-370  12.4 12.2 -3.1 -1.8 105.7 105.8 37.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees