Proteosome Component Pre2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-43   THR-44  14.9 14.5 9.4 18.7 68.1 65.9 173.9
 THR-44   MET-45  12.8 12.4 44.1 -32.9 114.6 97.1 -31.6
 MET-45   ALA-46  15.0 14.6 -53.5 54.2 79.0 68.9 -42.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-124   PHE-125  2.9 2.8 8.5 -3.0 71.4 75.2 5.0
 PHE-125   CYS-126  4.3 4.3 3.5 -15.1 142.0 133.5 124.6
 CYS-126   VAL-127  5.6 5.9 -0.6 -5.0 114.4 116.4 43.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees