Hla Class I Histocompatibility Antigen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-193   VAL-194  21.4 21.7 28.6 -30.9 66.0 70.9 7.6
 VAL-194   SER-195  24.0 24.5 11.2 -2.0 70.8 76.3 65.2
 SER-195   ASP-196  26.3 27.1 -2.3 5.6 73.6 80.3 5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-199   THR-200  21.8 22.3 8.0 -6.9 61.4 62.5 60.5
 THR-200   LEU-201  20.2 20.4 6.2 1.5 72.6 76.6 -25.4
 LEU-201   ARG-202  17.2 17.2 8.5 -7.9 83.3 84.1 34.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-213   THR-214  16.7 16.8 6.4 -13.4 106.4 108.5 25.4
 THR-214   LEU-215  16.5 16.7 7.7 12.6 55.9 67.6 6.5
 LEU-215   THR-216  15.9 15.8 9.2 6.1 99.0 112.1 -27.8
 THR-216   TRP-217  17.2 17.0 -33.2 26.9 102.0 103.4 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-227   THR-228  25.7 26.5 21.9 -7.5 121.0 103.9 -118.5
 THR-228   GLU-229  22.9 23.7 32.7 -60.2 123.9 123.1 150.4
 GLU-229   LEU-230  23.4 23.6 50.5 -43.7 78.5 87.6 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-247   VAL-248  21.2 21.2 2.3 -6.0 46.0 50.7 -82.3
 VAL-248   VAL-249  23.4 23.5 17.6 -34.2 126.3 129.8 100.8
 VAL-249   PRO-250  22.8 23.8 29.4 -5.1 65.3 61.6 109.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-261   GLN-262  11.4 11.3 -3.7 6.5 139.7 137.4 11.6
 GLN-262   HIS-263  12.2 12.2 2.9 3.1 116.3 117.4 -24.2
 HIS-263   GLU-264  12.9 13.0 3.7 -10.5 59.4 55.1 -92.7
 GLU-264   GLY-265  13.5 14.0 16.9 -19.0 115.0 107.3 78.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-266   PRO-267  8.5 8.8 13.4 -6.6 9.2 9.9 79.1
 PRO-267   LYS-268  7.6 7.7 8.7 -23.0 62.1 62.9 -0.2
 LYS-268   PRO-269  5.7 6.0 13.4 -5.6 130.1 140.0 -48.9
 PRO-269   LEU-270  8.1 7.8 3.4 -4.7 125.4 120.1 11.7
 LEU-270   THR-271  7.2 6.6 5.8 10.4 91.7 85.8 21.6
 LEU-270   THR-271  7.2 6.6 5.8 10.4 91.7 85.8 21.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-270   THR-271  7.2 6.6 5.8 10.4 91.7 85.8 21.6
 LEU-270   THR-271  7.2 6.6 5.8 10.4 91.7 85.8 21.6
 THR-271   LEU-272  9.0 8.4 18.0 -13.5 38.9 32.3 1.0
 LEU-272   ARG-273  9.4 9.2 2.4 2.5 86.1 85.8 32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees