Tryptophan-Trna Ligase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-7   ILE-8  12.1 11.9 4.8 -2.4 89.1 88.5 -1.9
 ILE-8   GLN-9  9.7 9.6 1.4 6.0 73.0 73.9 72.9
 GLN-9   PRO-10  11.5 11.4 0.9 6.9 34.1 26.1 63.1
 PRO-10   SER-11  12.3 12.0 74.4 -57.5 103.7 103.2 -40.2
 SER-11   GLY-12  13.1 11.7 160.5 129.0 62.8 44.3 -460.2
 GLY-12   VAL-13  11.2 11.8 147.5 -39.6 58.5 93.6 251.3
 VAL-13   ILE-14  8.1 8.7 -7.3 -59.6 48.1 68.6 278.6
 ILE-14   THR-15  5.0 5.2 -26.9 12.2 94.1 88.8 -85.6
 THR-15   ILE-16  3.7 3.7 -2.2 -8.3 83.1 93.0 15.8
 ILE-16   GLY-17  3.3 3.4 3.4 4.2 157.0 155.3 -57.0
 GLY-17   ASN-18  2.4 2.4 -6.3 11.2 90.0 96.0 -19.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ALA-181   ARG-182  4.7 5.2 -12.4 4.5 78.1 83.6 23.1
 ARG-182   ILE-183  3.2 3.6 -1.6 6.9 117.0 118.4 28.6
 ILE-183   MET-184  5.3 5.5 -7.4 -1.4 73.6 74.3 66.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-280   ARG-281  5.1 5.3 -9.5 -4.1 9.4 9.6 127.7
 ARG-281   PRO-282  5.9 5.9 8.6 -0.5 111.9 111.4 -47.6
 PRO-282   ILE-283  5.7 5.6 -6.1 5.0 110.0 111.6 6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees