Tp7 Fab

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-103   GLU-104  8.1 7.9 4.0 -5.8 88.0 90.8 -35.2
 GLU-104   ILE-105  4.7 4.4 -0.7 3.8 159.3 156.1 8.6
 ILE-105   ASN-106  4.6 4.4 -8.6 8.3 106.7 108.1 26.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-164   GLN-165  4.9 4.9 -9.9 -1.3 33.2 28.2 99.9
 GLN-165   ASP-166  5.8 5.4 2.6 -5.1 88.2 91.1 38.5
 ASP-166   SER-167  9.6 9.1 3.9 -0.3 125.2 131.1 -6.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-171   TYR-172  7.9 7.9 10.7 -20.2 165.9 159.0 76.1
 TYR-172   SER-173  7.2 7.4 4.1 -8.3 113.3 118.4 18.7
 SER-173   MET-174  9.8 9.7 3.2 -9.7 142.5 139.7 26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees