Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-81   CYS-82  23.5 22.5 22.1 -26.4 10.3 18.6 -4.7
 CYS-82   PRO-83  23.1 22.2 -59.9 -7.4 123.0 127.5 -24.3
 PRO-83   GLY-84  25.6 24.8 173.2 -25.5 59.5 19.7 140.9
 GLY-84   HIS-85  27.1 22.5 171.4 -19.3 11.1 89.3 96.3
 HIS-85   ALA-86  28.2 20.0 164.4 -2.4 55.2 73.6 -221.2
 ALA-86   ASP-87  26.2 18.0 -3.2 -10.4 103.3 47.8 0.4
 ASP-87   TYR-88  25.8 18.7 -17.5 57.6 53.3 38.2 -12.6
 TYR-88   ILE-89  23.8 17.1 -67.7 -3.0 65.2 104.2 -11.8
 ILE-89   LYS-90  21.1 13.9 -1.3 -22.3 77.5 88.0 -6.5
 LYS-90   ASN-91  18.4 13.8 16.2 -20.1 165.2 156.2 6.1
 ASN-91   MET-92  19.7 14.2 27.6 -23.1 123.3 113.6 -7.4
 MET-92   ILE-93  20.0 11.6 29.7 -39.9 93.1 73.0 -4.1
 ILE-93   THR-94  16.6 9.3 17.9 -41.0 130.8 111.6 12.6
 THR-94   GLY-95  14.9 11.2 101.9 90.2 161.8 175.0 161.2
 GLY-95   ALA-96  16.3 9.7 67.7 -11.6 102.0 131.0 -26.5
 ALA-96   ALA-97  15.6 13.1 -79.5 29.5 94.1 62.1 16.9
 ALA-97   GLN-98  11.9 13.6 -156.7 -77.4 28.9 74.3 -73.8
 GLN-98   MET-99  11.5 11.7 23.4 84.9 139.2 126.0 -68.8
 MET-99   ASP-100  13.1 14.4 -69.3 84.7 91.4 68.0 0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-213   VAL-214  9.6 9.1 92.4 2.2 98.4 119.1 -30.8
 VAL-214   ARG-215  6.7 6.9 -11.7 88.7 136.2 88.9 47.7
 ARG-215   ASP-216  3.3 3.4 -69.0 124.6 72.4 124.6 49.3
 ASP-216   VAL-217  0.6 0.6 -173.4 38.8 104.7 66.9 5.0
 VAL-217   ASP-218  4.0 3.1 -44.0 1.5 90.2 84.3 -0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees