Collagen-Like Peptide

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-130   PRO-131  15.9 16.2 -15.6 25.8 42.0 47.1 -1.1
 PRO-131   PRO-132  13.3 13.5 -12.0 33.5 99.3 108.6 -10.6
 PRO-132   GLY-133  9.8 10.1 149.2 -59.9 109.7 62.4 -11.8
 GLY-133   SER-134  9.8 7.1 0.1 173.3 104.4 131.4 87.3
 SER-134   GLY-135  6.5 4.7 102.2 155.5 79.0 78.3 -90.5
 GLY-135   TYR-136  4.1 2.9 -106.1 29.1 69.6 129.0 47.0
 TYR-136   ILE-137  0.9 0.5 -151.6 -2.5 87.0 66.5 70.1
 ILE-137   PRO-138  4.4 4.3 26.4 6.6 80.6 69.7 13.1
 PRO-138   GLU-139  7.7 7.6 10.3 -9.0 35.9 34.8 0.5
 GLU-139   ALA-140  9.8 9.9 -0.9 -0.9 79.9 77.5 1.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees