DNA Beta-Glucosyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-170   ASP-171  6.1 6.5 11.4 -4.8 105.5 108.5 -14.8
 ASP-171   PHE-172  5.4 5.6 -5.0 12.3 133.5 131.9 53.7
 PHE-172   GLN-173  3.9 4.1 -4.4 -7.9 72.8 68.7 23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-262   ASP-263  3.9 3.5 7.6 1.4 93.5 89.6 47.3
 ASP-263   ASN-264  3.0 2.3 3.5 -0.2 74.2 78.0 17.5
 ASN-264   PHE-265  6.2 5.7 7.8 -3.9 14.5 20.5 30.2
 PHE-265   ILE-266  6.6 6.3 8.1 -8.5 62.5 55.1 -44.7
 ILE-266   THR-267  4.0 4.3 -2.5 -8.6 123.7 116.1 -11.5
 THR-267   LEU-268  6.2 6.8 -1.3 9.6 163.3 158.6 62.3
 LEU-268   ARG-269  7.1 7.9 -4.8 0.2 94.5 95.3 -11.3
 ARG-269   VAL-270  7.8 8.3 7.3 0.8 87.5 89.9 11.6
 ARG-269   VAL-270  7.8 8.3 7.3 0.8 87.5 89.9 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-269   VAL-270  7.8 8.3 7.3 0.8 87.5 89.9 11.6
 ARG-269   VAL-270  7.8 8.3 7.3 0.8 87.5 89.9 11.6
 VAL-270   TRP-271  4.6 4.9 -5.8 -1.5 24.4 17.2 40.8
 TRP-271   GLU-272  3.3 3.9 -2.4 -1.0 55.2 56.2 12.6
 GLU-272   THR-273  6.8 7.5 3.2 -2.8 78.5 82.0 -2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-333   THR-334  9.0 7.9 0.5 -7.5 106.4 105.7 -2.7
 THR-334   ARG-335  6.7 5.9 0.2 10.0 37.3 35.3 58.5
 ARG-335   ALA-336  5.5 4.9 -10.5 14.1 123.6 118.3 2.4
 ALA-336   LYS-337  9.0 8.4 -5.7 3.7 71.5 71.4 -6.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees