Delta Prime

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-204   PHE-205  5.4 4.3 4.8 -8.1 50.7 51.8 15.9
 PHE-205   GLN-206  3.1 2.9 -25.6 44.2 152.7 149.5 57.5
 GLN-206   GLY-207  5.3 4.4 -107.5 171.9 89.7 102.8 46.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-256   LYS-257  6.2 6.3 -40.1 36.6 104.5 105.0 -13.1
 LYS-257   ARG-258  3.7 3.5 -77.2 -111.6 103.3 104.8 259.3
 VAL-265   THR-266  2.7 4.2 12.5 16.8 22.1 22.4 158.5
 VAL-265   THR-266  2.7 4.2 12.5 16.8 22.1 22.4 158.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-265   THR-266  2.7 4.2 12.5 16.8 22.1 22.4 158.5
 VAL-265   THR-266  2.7 4.2 12.5 16.8 22.1 22.4 158.5
 THR-266   ASN-267  0.6 1.7 2.6 -8.2 47.4 45.4 -63.3
 ASN-267   VAL-268  3.9 4.8 4.3 -4.9 90.5 88.9 20.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees