Glycogen Phosphorylase, Muscle Form

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-163   GLY-164  10.1 9.4 17.5 -0.8 165.2 164.4 -173.7
 GLY-164   ILE-165  9.8 9.7 -30.1 -12.4 72.0 88.2 103.7
 ILE-165   PHE-166  11.7 12.9 -51.9 99.2 122.0 93.7 296.0
 PHE-166   ASN-167  13.4 13.5 30.6 -46.7 113.1 114.9 -45.0
 ASN-167   GLN-168  12.9 13.0 9.3 -4.8 97.0 100.4 10.0
 GLN-168   LYS-169  16.2 16.3 16.4 -20.8 77.5 73.9 -14.5
 LYS-169   ILE-170  18.7 18.5 -11.1 9.9 63.1 66.3 -32.9
 ILE-170   SER-171  22.0 21.9 1.5 13.9 53.8 47.7 79.3
 SER-171   GLY-172  25.1 24.6 -20.5 -9.2 70.2 64.5 289.8
 GLY-172   GLY-173  28.6 27.9 21.3 1.0 154.8 138.7 -273.7
 GLY-173   TRP-174  27.0 27.0 -4.2 -12.6 90.9 101.7 -109.2
 TRP-174   GLN-175  25.7 25.9 -3.8 -10.0 104.9 110.9 -60.1
 GLN-175   MET-176  22.3 22.4 -17.0 34.3 163.0 157.0 112.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-180   ASP-181  9.7 9.6 0.3 -16.1 125.9 120.4 213.3
 ASP-181   TRP-182  7.4 6.8 30.1 -10.9 70.6 68.1 -65.9
 TRP-182   LEU-183  4.3 4.2 -12.8 10.0 57.1 55.1 76.4
 LEU-183   ARG-184  2.6 2.3 -3.1 0.7 35.6 26.5 8.1
 ARG-184   TYR-185  3.1 2.8 19.1 -19.8 107.9 110.0 -56.3
 TYR-185   GLY-186  2.9 2.4 14.3 -5.0 77.5 70.6 88.0
 GLY-186   ASN-187  2.3 3.0 5.6 -5.4 12.3 11.5 28.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-488   ARG-489  4.8 5.3 12.0 -18.8 48.0 42.2 -109.6
 ARG-489   ARG-490  7.0 7.0 -11.4 13.0 121.6 124.1 75.6
 ARG-490   TRP-491  4.4 4.6 4.6 -3.2 122.8 130.0 -56.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-648   ARG-649  12.4 12.0 8.8 -8.6 107.2 106.3 35.6
 ARG-649   VAL-650  8.7 8.3 10.2 -7.9 57.1 59.1 61.2
 VAL-650   SER-651  5.2 4.9 5.6 -4.9 90.5 94.0 -24.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-653   GLU-654  8.2 8.0 -0.7 -1.6 68.4 69.1 -35.1
 GLU-654   LYS-655  7.2 7.4 -10.9 15.6 82.1 81.3 -26.9
 LYS-655   VAL-656  11.0 11.1 11.2 -10.5 133.7 134.4 71.7
 VAL-656   ILE-657  12.5 12.2 -5.1 -0.6 19.9 21.8 53.4
 ILE-657   PRO-658  10.2 9.8 -4.2 27.4 55.7 60.8 -183.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-695   ASN-696  11.0 10.5 -12.8 -10.1 125.0 142.0 -252.8
 ASN-696   VAL-697  11.2 11.1 4.3 -0.3 17.3 26.2 97.2
 VAL-697   GLU-698  11.9 11.9 -12.3 4.8 107.9 101.6 -84.7
 GLU-698   MET-699  9.0 9.0 8.6 -17.0 91.3 87.0 -42.2
 MET-699   ALA-700  6.7 6.5 10.3 3.0 32.0 34.7 113.2
 ALA-700   GLU-701  8.4 8.3 1.7 -12.1 39.5 42.2 -194.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-809   LYS-810  3.8 4.2 14.7 -11.4 103.0 100.4 7.5
 LYS-810   PHE-811  5.3 5.3 0.6 -7.8 153.9 155.5 18.4
 PHE-811   SER-812  4.3 4.3 1.2 -2.2 146.6 144.5 68.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees