Lactose Permease

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-207   PHE-208  20.9 26.5 19.8 -31.3 108.2 124.5 29.1  PHE-208   SER-209  17.8 24.4 50.0 -0.5 174.5 147.9 -143.8  SER-209   LEU-210  18.2 22.8 14.3 -2.3 105.4 94.3 -48.0  LEU-210   LYS-211  15.6 19.2 34.3 -10.5 99.2 114.9 -45.1  LYS-211   LEU-212  18.8 20.5 25.1 -43.5 29.0 45.4 -50.0  LEU-212   ALA-213  19.9 21.6 52.5 -19.4 78.8 60.7 55.9  ALA-213   LEU-214  17.1 17.9 -18.6 14.3 53.8 63.7 7.4  LEU-214   GLU-215  18.3 17.3 -8.3 27.9 97.8 100.7 16.8  GLU-215   LEU-216  21.9 20.7 -29.0 40.3 149.8 144.8 44.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees