Cell Division Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-30   ALA-31  16.9 18.9 -27.5 -21.6 40.3 56.8 42.7
 ALA-31   LEU-32  15.6 17.6 -89.8 69.6 63.6 41.4 20.1
 LEU-32   LYS-33  13.5 15.8 6.0 13.3 128.0 132.4 -21.1
 LYS-33   LYS-34  11.5 13.8 84.0 -87.9 135.9 150.8 -6.7
 LYS-34   ILE-35  10.1 12.4 28.7 -66.5 105.3 116.9 15.9
 ILE-35   ARG-36  7.7 9.8 33.2 -84.9 161.3 146.0 74.3
 ARG-36   LEU-37  8.6 8.6 -7.3 -71.6 61.3 63.4 48.9
 LEU-37   ASP-38  6.2 5.4 170.1 45.5 93.7 154.3 -251.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-54   LEU-55  3.3 5.2 14.2 -25.2 110.9 122.3 -0.5
 LEU-55   LYS-56  3.9 5.1 6.4 -21.6 122.9 134.9 8.1
 LYS-56   GLU-57  2.5 2.0 -50.2 62.3 8.4 43.2 -14.7
 GLU-57   LEU-58  1.1 3.0 -2.2 -29.1 54.4 55.0 19.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees