Elongation Factor 1-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-91   ALA-92  19.8 21.1 18.1 -51.3 133.8 137.4 63.0
 ALA-92   PRO-93  17.3 19.8 30.4 -15.7 129.5 139.8 -27.7
 PRO-93   GLY-94  19.1 21.6 -12.0 -8.3 23.7 41.2 38.8
 GLY-94   HIS-95  18.9 21.5 -18.8 -1.8 75.2 31.4 38.1
 HIS-95   ARG-96  19.0 22.7 1.6 4.4 101.3 106.5 -19.5
 ARG-96   ASP-97  16.3 20.0 -3.9 11.4 131.8 99.7 17.6
 ASP-97   PHE-98  16.5 21.7 -9.1 -50.2 142.2 155.9 -171.1
 PHE-98   ILE-99  15.0 20.6 55.4 -14.5 93.9 72.5 19.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-102   ILE-103  10.2 16.0 -3.9 16.6 100.8 103.0 8.9
 ILE-103   THR-104  7.3 12.7 3.6 41.4 39.1 21.8 106.5
 THR-104   GLY-105  9.1 13.3 -28.7 7.2 138.7 130.5 -46.7
 GLY-105   THR-106  11.1 14.1 144.5 15.9 36.4 91.9 -296.8
 THR-106   SER-107  10.3 11.1 139.1 -115.0 95.7 61.7 90.6
 SER-107   GLN-108  9.7 8.6 -95.1 -4.7 36.1 172.5 256.8
 GLN-108   ALA-109  7.6 10.1 -168.2 -11.2 104.1 106.5 -92.8
 ALA-109   ASP-110  9.6 10.6 6.4 -4.3 73.7 75.7 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-141   THR-142  7.6 7.5 -1.7 -11.2 94.2 93.2 -15.9
 THR-142   LEU-143  4.0 4.3 10.3 -2.1 27.0 31.3 17.2
 LEU-143   GLY-144  3.0 5.5 -1.7 -1.5 139.2 140.8 -2.0
 GLY-144   VAL-145  5.4 4.6 15.4 -15.9 65.5 57.0 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-238   PRO-239  3.7 2.3 -52.6 9.5 106.0 91.6 -21.4
 PRO-239   THR-240  1.4 2.3 33.6 -15.1 32.4 46.7 -23.2
 THR-240   ASP-241  0.9 3.5 -159.6 157.8 109.1 81.0 41.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-343   VAL-344  1.4 1.4 3.6 2.4 59.5 65.8 12.2
 VAL-344   LEU-345  2.5 2.3 -16.0 15.3 100.6 99.8 -5.0
 LEU-345   ASN-346  4.6 4.5 131.5 -76.4 21.7 29.0 155.8
 ASN-346   HIS-347  6.6 6.7 12.8 -7.2 92.8 104.6 5.4
 ASN-346   HIS-347  6.6 6.7 12.8 -7.2 92.8 104.6 5.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-346   HIS-347  6.6 6.7 12.8 -7.2 92.8 104.6 5.4
 ASN-346   HIS-347  6.6 6.7 12.8 -7.2 92.8 104.6 5.4
 HIS-347   PRO-348  8.6 7.7 -21.8 0.2 23.4 8.8 41.3
 PRO-348   GLY-349  10.0 9.1 -71.2 21.5 83.9 47.1 76.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees