Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PRO-632   ILE-633  13.3 13.2 87.5 -79.1 157.6 160.2 -84.2
 ILE-633   GLU-634  11.7 11.5 10.0 5.4 108.7 110.2 -27.6
 GLU-634   SER-635  9.9 10.0 10.1 -48.8 167.5 154.0 195.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-688   GLY-689  15.6 15.3 -4.3 -13.7 105.9 105.1 -66.2
 GLY-689   VAL-690  13.3 12.9 3.0 -15.5 124.6 124.8 42.1
 VAL-690   ALA-691  10.3 10.0 -9.4 -12.7 46.8 21.8 121.5
 ALA-691   ARG-692  12.5 11.7 12.1 3.9 89.2 91.0 -15.5
 ARG-692   VAL-693  13.6 13.0 3.5 -14.7 91.6 90.4 13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-697   GLY-698  12.2 12.0 0.8 -8.9 134.0 138.8 28.2
 GLY-698   LYS-699  11.8 11.4 2.3 6.6 127.4 127.6 -16.7
 LYS-699   TYR-700  14.9 14.6 -0.2 -6.0 45.4 42.2 42.1
 TYR-700   ALA-701  13.5 13.2 8.4 -0.2 117.0 112.1 -86.9
 ALA-701   TYR-702  10.9 10.5 -8.8 13.7 49.2 54.7 21.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees